PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS143835 to PF13698 (DUF4156)

VIMSS143835 has 128 amino acids

Query:       DUF4156  [M=90]
Accession:   PF13698.10
Description: Domain of unknown function (DUF4156)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.8e-37  113.4   0.2    3.4e-37  113.1   0.2    1.1  1  VIMSS143835  


Domain annotation for each sequence (and alignments):
>> VIMSS143835  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.1   0.2   3.4e-37   3.4e-37       1      90 []      36     127 ..      36     127 .. 0.94

  Alignments for each domain:
  == domain 1  score: 113.1 bits;  conditional E-value: 3.4e-37
      DUF4156   1 nelspegeaVklvdskpaseCqllGevtgsqgnwlsgilssnkelvrgalndLrneAaalGgntivlvtspaset..ls..etdvtmlgqvYkC 90 
                  n+ls++ge+Vk+ d++p+seCql+G+vtg+q+nwlsg+   +++++rga+ndLrn+Aaa+Ggn+i+++tsp set  +s  +++++m+gqvYkC
  VIMSS143835  36 NTLSSAGEQVKFSDTQPGSECQLVGQVTGTQSNWLSGQ-GGESSSMRGAANDLRNKAAAMGGNVIYGATSP-SETflSSfaPLESKMVGQVYKC 127
                  5799**********************************.********************************.666763377************* PP



Or compare VIMSS143835 to CDD or PaperBLAST