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Align NP_071988.2 to PF13778 (DUF4174)

NP_071988.2 has 949 amino acids

Query:       DUF4174  [M=120]
Accession:   PF13778.10
Description: Domain of unknown function (DUF4174)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.2e-108  344.4   0.0    4.8e-39  119.8   0.0    3.4  3  NP_071988.2  


Domain annotation for each sequence (and alignments):
>> NP_071988.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  107.7   0.0   2.6e-35   2.6e-35       2     120 .]     142     270 ..     141     270 .. 0.97
   2 !  112.9   0.3   6.4e-37   6.4e-37       2     119 ..     615     747 ..     614     748 .. 0.96
   3 !  119.8   0.0   4.8e-39   4.8e-39       1     120 []     770     901 ..     770     901 .. 0.97

  Alignments for each domain:
  == domain 1  score: 107.7 bits;  conditional E-value: 2.6e-35
      DUF4174   2 LasfkwkrRlLiisapseddarlkqqrealq.aaecelaeRdllvielvgsgaketgki.........eeeqlsselieeLrkelkiskekfsmvLig 89 
                  Lasf++k+R+++isap++++ +++ +++ l+ ++ celaeR+++ i+l+++ ++e gk+          e++l+++li +L++ lk++k+kfsmvL++
  NP_071988.2 142 LASFAGKNRVWVISAPHASEGYYRLMMSLLKdDVYCELAERHIQQIVLFHQAGEEGGKVrritsegqiLEQPLDPNLIPKLMSFLKLEKGKFSMVLLK 239
                  89****************************66***************************99999999989999************************* PP

      DUF4174  90 kdggvkeryeapvsleelfdlIDampmRqqE 120
                  k ++v+ery++pv+le+++++ID+ p+R+ E
  NP_071988.2 240 KTLQVEERYPYPVRLEAMYEVIDQGPIRRIE 270
                  ****************************966 PP

  == domain 2  score: 112.9 bits;  conditional E-value: 6.4e-37
      DUF4174   2 LasfkwkrRlLiisapseddarlkqqrealqaaecelaeRdllvielvgsgaketgkieeeql...............sselieeLrkelkiskekfs 84 
                  L sf++krRlL+i++p+++++++ qqr+++ ++ c++a+R ++v++++g  +++++ki++ ql               +++li+eLrke+++++++f 
  NP_071988.2 615 LGSFEGKRRLLLITTPKAENNMYVQQRDEYLESFCKMATRRISVVTIFGPVNNSSMKIDHFQLdnekpmrvvddedlvDQHLISELRKEYGMTYNDFF 712
                  779*******************************************************88888888888999999999******************** PP

      DUF4174  85 mvLigkdggvkeryeapvsleelfdlIDampmRqq 119
                  mvL++ d++vk+ ye p++++++fdlID++++R +
  NP_071988.2 713 MVLTDVDLRVKQYYEVPIAMKSVFDLIDTFQSRIK 747
                  ********************************976 PP

  == domain 3  score: 119.8 bits;  conditional E-value: 4.8e-39
      DUF4174   1 pLasfkwkrRlLiisapseddarlkqqrealqaaecelaeRdllvielvgsgaketgki............eeeqlsselieeLrkelkiskekfsmv 86 
                  +L++f+w+rRlL+isap+++d+ ++qq +al++++c++  R++++++l+g g+++ g i            e+e ++++l++++r+++++s+e+fsm+
  NP_071988.2 770 FLSRFRWRRRLLVISAPNDEDWAYSQQLSALNGQACNFGLRHITILKLLGVGEEVGG-IlelfpingsstvEREDVPAHLVKDIRNYFQVSPEYFSML 866
                  699************************************************999877.669999999999999999********************** PP

      DUF4174  87 Ligkdggvkeryeapv.sleelfdlIDampmRqqE 120
                  L+gkdg+vk++y++p+ s+  ++dlID+m++R+qE
  NP_071988.2 867 LVGKDGNVKSWYPSPMwSMVIVYDLIDSMQLRRQE 901
                  **********************************9 PP



Or compare NP_071988.2 to CDD or PaperBLAST