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Align NP_955806.1 to PF13778 (DUF4174)

NP_955806.1 has 950 amino acids

Query:       DUF4174  [M=120]
Accession:   PF13778.10
Description: Domain of unknown function (DUF4174)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   3.1e-109  346.3   0.0    6.2e-39  119.4   0.0    3.5  3  NP_955806.1  


Domain annotation for each sequence (and alignments):
>> NP_955806.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.1   0.0   8.2e-35   8.2e-35       2     120 .]     142     270 ..     141     270 .. 0.97
   2 !  116.6   0.3   4.7e-38   4.7e-38       2     119 ..     616     748 ..     615     749 .. 0.96
   3 !  119.4   0.0   6.2e-39   6.2e-39       1     120 []     771     902 ..     771     902 .. 0.97

  Alignments for each domain:
  == domain 1  score: 106.1 bits;  conditional E-value: 8.2e-35
      DUF4174   2 LasfkwkrRlLiisapseddarlkqqrealq.aaecelaeRdllvielvgsgaketgki.........eeeqlsselieeLrkelkiskekfsmvLig 89 
                  Lasf++k+R+++isap++++ +++ +++ l+ ++ celaeR+++ i+l+++ ++e gk+          e++l+++li +L++ lk++k+kf mvL++
  NP_955806.1 142 LASFAGKNRVWVISAPHASEGYYRLMMSLLKdDVYCELAERHIQQIVLFHQAGEEGGKVrritsegqiLEQPLDPSLIPKLMSFLKLEKGKFGMVLLK 239
                  89****************************66***************************99999999989999************************* PP

      DUF4174  90 kdggvkeryeapvsleelfdlIDampmRqqE 120
                  k ++v+ery++pv+le+++++ID+ p+R+ E
  NP_955806.1 240 KTLQVEERYPYPVRLEAMYEVIDQGPIRRIE 270
                  ****************************966 PP

  == domain 2  score: 116.6 bits;  conditional E-value: 4.7e-38
      DUF4174   2 LasfkwkrRlLiisapseddarlkqqrealqaaecelaeRdllvielvgsgaketgkieeeql...............sselieeLrkelkiskekfs 84 
                  L sf++krRlL+i+ap+++++++ qqr+++ ++ c++a+R+++vi+++g  +++t+ki++ ql               ++ li+eLrke+++++++f 
  NP_955806.1 616 LGSFEGKRRLLLITAPKAENNMYVQQRDEYLESFCKMATRKISVITIFGPVNNSTMKIDHFQLdnekpmrvvddedlvDQRLISELRKEYGMTYNDFF 713
                  779*******************************************************88888888888999999999******************** PP

      DUF4174  85 mvLigkdggvkeryeapvsleelfdlIDampmRqq 119
                  mvL++ d++vk+ ye p++++++fdlID++++R +
  NP_955806.1 714 MVLTDVDLRVKQYYEVPITMKSVFDLIDTFQSRIK 748
                  ********************************976 PP

  == domain 3  score: 119.4 bits;  conditional E-value: 6.2e-39
      DUF4174   1 pLasfkwkrRlLiisapseddarlkqqrealqaaecelaeRdllvielvgsgaketgki...........eeeqlsselieeLrkelkiskekfsmvL 87 
                  +L++f+w+rRlL+isap+++d+ ++qq +al++++c++  R++++++l+g g+++ g +           e+e ++++l++++r+++++s+e+fsm+L
  NP_955806.1 771 FLSRFRWRRRLLVISAPNDEDWAYSQQLSALSGQACNFGLRHITILKLLGVGEEVGGVLelfpingssvvEREDVPAHLVKDIRNYFQVSPEYFSMLL 868
                  699**************************************************9988669999999999999999*********************** PP

      DUF4174  88 igkdggvkeryeapv.sleelfdlIDampmRqqE 120
                  +gkdg+vk++y++p+ s+  ++dlID+m++R+qE
  NP_955806.1 869 VGKDGNVKSWYPSPMwSMVIVYDLIDSMQLRRQE 902
                  *********************************9 PP



Or compare NP_955806.1 to CDD or PaperBLAST