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Align NP_001322622.1 to PF14309 (DUF4378)

NP_001322622.1 has 978 amino acids

Query:       DUF4378  [M=165]
Accession:   PF14309.6
Description: Domain of unknown function (DUF4378)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-45  141.3   3.0      2e-45  141.3   3.0    2.9  3  NP_001322622.1  


Domain annotation for each sequence (and alignments):
>> NP_001322622.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.8   0.0     0.032     0.032      71     116 ..      83     123 ..      60     162 .. 0.64
   2 ?   -3.4   0.1      0.59      0.59      95     121 ..     733     760 ..     713     769 .. 0.54
   3 !  141.3   3.0     2e-45     2e-45       1     165 []     780     955 ..     780     955 .. 0.83

  Alignments for each domain:
  == domain 1  score: 0.8 bits;  conditional E-value: 0.032
         DUF4378  71 LaeilalelkrslaepsskvssakkrrkkklsgeqLleevwseiee 116
                     L+e+l+    r ++e +s+vs++++++++++ ++++ +ev+ ei+ 
  NP_001322622.1  83 LSEKLT----RLSTE-CSRVSFSSSCSSSSPLSSEVNREVQPEISA 123
                     666655....32333.334444444434446666666666666663 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.59
         DUF4378  95 kr.rkkklsgeqLleevwseieewlsse 121
                     +   +++ ++ q +e++ ++++++ ss+
  NP_001322622.1 733 SFsPEMNRKKLQNVEHLVQKLKRLNSSH 760
                     2223333444455666666666655544 PP

  == domain 3  score: 141.3 bits;  conditional E-value: 2e-45
         DUF4378   1 dfeYireiLlasglllkd..sdellsrwhssespidpslfeeleekkssssekkrreerserklLFDlvneiLaeilalelkrslaepsskvssa 93 
                     d++Yi+eiLlasglll+d  s+   ++ h s++pi+p+lf ++e++k++   +++++e+++rkl+FD+vne+L ++la    +s+++p++k+++a
  NP_001322622.1 780 DHRYISEILLASGLLLRDlgSGLTTFQLHPSGHPINPELFLVIEQTKGC---SSSSNEKINRKLVFDAVNEMLGKKLAFV--ESYVDPWMKQAKA 869
                     89****************886666777888888**************96...444569******************9955..8788888775444 PP

         DUF4378  94 kkrrkkklsgeqLleevwseieewlsse............elvvde.........lvdkdlsrrsgkwldledevdeigleierlilkdLveE 165
                        rkk+ls+++Ll+e++seie +++++            e    e         ++d+d++ +s+kw+d++d +++++l++erl++kdLv E
  NP_001322622.1 870 ---RKKVLSAQNLLKELCSEIEILQKQAkkrsenlllleeE----EeeeedflkcILDEDMAIQSEKWTDFDDAIPGLVLDMERLLFKDLVKE 955
                     ...4789***************6555555566665555431....0334567777************************************98 PP



Or compare NP_001322622.1 to CDD or PaperBLAST