NP_055625.4 has 3117 amino acids
Query: DUF4378 [M=166]
Accession: PF14309.10
Description: Domain of unknown function (DUF4378)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-10 27.6 1.4 1.8e-10 27.6 1.4 3.4 2 NP_055625.4
Domain annotation for each sequence (and alignments):
>> NP_055625.4
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.4 0.2 0.61 0.61 102 148 .. 2665 2704 .. 2649 2721 .. 0.56
2 ! 27.6 1.4 1.8e-10 1.8e-10 52 165 .. 2964 3098 .. 2922 3099 .. 0.85
Alignments for each domain:
== domain 1 score: -3.4 bits; conditional E-value: 0.61
DUF4378 102 sgeelleevwseirswlspeselvldelvdkdlssregkwldledev 148
++++l+ + ++++ ++ +ld+ +++l+++ + ++ +e
NP_055625.4 2665 ENKDLISDATEKVSI--AA-EDDTLDNTFSEELEKQ-Q---QFTEEE 2704
455666666666665..22.4678888888888877.3...333333 PP
== domain 2 score: 27.6 bits; conditional E-value: 1.8e-10
DUF4378 52 etresrserklLFDlvneiLveilel.fkrsfsyppskvssassrrrpkklsgeelleevwseir.................swlspe.....sel 124
e++++r ++ +FDl ei +ei++ + + +++k ++ +s+ ++ +++ + l+e+ s i +w ++ +
NP_055625.4 2964 ESTSKRVYKQAVFDLTKEIFEEIFAEdP-NLNQPVWMKPCRINSSYFRR-VKNPNNLDEIKSFIAsevlklfslkkepnhktDWQKMMkfgrkKRD 3057
5578999****************99755.44555666666666665555.7888899999999999999999999999999966666679999999 PP
DUF4378 125 vldelvdkdlssregkwldledeveeigleierlIledLve 165
+d+++ ++l ++e +w++++++ ++ +++++ I+e+L++
NP_055625.4 3058 RVDHILVQELHEEEAQWVNYDEDELCVKMQLADGIFETLIK 3098
***************************************97 PP
Or compare NP_055625.4 to CDD or PaperBLAST