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Align NP_177556.3 to PF14309 (DUF4378)

NP_177556.3 has 1025 amino acids

Query:       DUF4378  [M=165]
Accession:   PF14309.6
Description: Domain of unknown function (DUF4378)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.4e-46  143.4   0.9    4.4e-46  143.4   0.9    2.5  2  NP_177556.3  


Domain annotation for each sequence (and alignments):
>> NP_177556.3  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.6   0.1     0.087     0.087      92     116 ..     624     648 ..     567     686 .. 0.66
   2 !  143.4   0.9   4.4e-46   4.4e-46       1     165 []     820    1002 ..     820    1002 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.6 bits;  conditional E-value: 0.087
      DUF4378  92 sakkr.rkkklsgeqLleevwseiee 116
                  s++    +++++g++ l++v  ++++
  NP_177556.3 624 STS-PgGRRRPKGQKSLQQVDDQLSQ 648
                  222.2233445666666666666654 PP

  == domain 2  score: 143.4 bits;  conditional E-value: 4.4e-46
      DUF4378    1 dfeYireiLlasglllkd..sdellsrwhssespidpslfeeleekksss........sekkrreerserklLFDlvneiLaeilalelkrslaep 86  
                   d++Yi+eiLlasglll+d  s+   ++ h s++pi+p+lf +le++k+ss        ++k  ++e+++rkl+FDlvneiL+e+la+   + +++p
  NP_177556.3  820 DHRYISEILLASGLLLRDlgSGLTTFQLHPSGHPINPELFFVLEQTKGSStthllhkeESKVLKNEKLNRKLVFDLVNEILVEKLASV--EATTNP 913 
                   89****************886666777888888***************99*******9888889*********************976..444555 PP

      DUF4378   87 sskvssakkr.rkkklsgeqLleevwseieewlsse............elvvdelvdkdlsrrsgkwldledevdeigleierlilkdLveE 165 
                    +k   +  + +kk +s++qLl+e++s ie  ++++            +  + +++++d+  rsg+w d+++e+++++l++erl++kdLv+E
  NP_177556.3  914 LMK---SYAKvTKKAVSAQQLLKELCSAIETQQKQAtkrsenflleeeDDFLKSILAEDVTIRSGNWADFSGEMSGLVLDVERLVFKDLVNE 1002
                   555...3334468899**************533333555654544445666666************************************99 PP



Or compare NP_177556.3 to CDD or PaperBLAST