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Align VIMSS10098819 to PF14309 (DUF4378)

VIMSS10098819 has 540 amino acids

Query:       DUF4378  [M=165]
Accession:   PF14309.6
Description: Domain of unknown function (DUF4378)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.8e-19   55.5   1.5    4.8e-19   55.5   1.5    2.8  3  VIMSS10098819  


Domain annotation for each sequence (and alignments):
>> VIMSS10098819  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.2   0.0      0.55      0.55      50      66 ..     141     157 ..     116     158 .. 0.76
   2 ?   -2.3   0.0      0.28      0.28       8      32 ..     224     247 ..     221     275 .. 0.68
   3 !   55.5   1.5   4.8e-19   4.8e-19       2     165 .]     384     520 ..     383     520 .. 0.77

  Alignments for each domain:
  == domain 1  score: -3.2 bits;  conditional E-value: 0.55
        DUF4378  50 ekkrreerserklLFDl 66 
                    +++++e+r +r  +FD+
  VIMSS10098819 141 QRSASESRVTRDYIFDF 157
                    44567999999999996 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.28
        DUF4378   8 iLlasglllkdsdellsrwhssesp 32 
                    +L++s l ++ s +l++  hs+ +p
  VIMSS10098819 224 LLHSSSLKHQ-SRNLVFDHHSPIKP 247
                    5667776444.55666666665444 PP

  == domain 3  score: 55.5 bits;  conditional E-value: 4.8e-19
        DUF4378   2 feYireiLlasglllkdsdellsrwhssespidpslfeeleekkssssekkrreerserklLFDlvneiLaeilalelkrslaepsskvssakkrr 97 
                    + Yi++iL as  l ++s                + f  le+++  + + ++r    er+l+FD+v+ei a +        ++ p+++v  a    
  VIMSS10098819 384 YVYISDILRASDCLPQES----------------DSFSFLEKQQYLKGKCASRAAAQERRLIFDAVQEIVARR-------RSLPPWMMVGEAD--- 453
                    789********9886653................44555555444444445688999****************.......4567776654443... PP

        DUF4378  98 kkklsgeqLleevwseieewlsseelvvde........lvdkdlsrrsgkwldledevdeigleierlilkdLveE 165
                           +  + +wse ++++++++++ ++        ++ +dls+   +w d+++e++e +l++erli+kdL+ E
  VIMSS10098819 454 -------NKMQVIWSEFQKIRDKKSSTEEDdlvgyvcgVLGRDLSED--RWRDFQVEMSEAVLDVERLIFKDLIGE 520
                    .......4468899999986666655555578888999*******77..*************************98 PP



Or compare VIMSS10098819 to CDD or PaperBLAST