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Align VIMSS10104115 to PF14309 (DUF4378)

VIMSS10104115 has 835 amino acids

Query:       DUF4378  [M=165]
Accession:   PF14309.6
Description: Domain of unknown function (DUF4378)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-41  129.2   0.1    1.1e-41  129.2   0.1    2.4  2  VIMSS10104115  


Domain annotation for each sequence (and alignments):
>> VIMSS10104115  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.4      0.22      0.22      88     116 ..     106     135 ..      86     166 .. 0.61
   2 !  129.2   0.1   1.1e-41   1.1e-41       2     165 .]     665     830 ..     664     830 .. 0.91

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.22
        DUF4378  88 skvssakkr.rkkklsgeqLleevwseiee 116
                    + +++ +++ ++kkl++e+  ++ +sei++
  VIMSS10104115 106 KTKKKHNPEeKSKKLNSEERSRKTHSEIKR 135
                    334444445556677777777777777776 PP

  == domain 2  score: 129.2 bits;  conditional E-value: 1.1e-41
        DUF4378   2 feYireiLlasglllkdsdellsrwhssespidpslfeeleekksss.......sekkrreerserklLFDlvneiLaeilalelkrslaepsskv 90 
                    f+Y+r+iL+ sg+      e+ls+w+ + +p+dp ++ee+ ++ +++       s+++++  ++++ lLFDl+ne+L ei++    rs+ ++++  
  VIMSS10104115 665 FNYVRDILEISGFN---APESLSMWQLDYQPLDPLVYEEVTTTTTGCmfqdpecSRNEEEGGNCNHLLLFDLINEVLIEIYE----RSYHYYPKPL 753
                    89***********6...4567*******************99998889******888889********************66....5566666555 PP

        DUF4378  91 ssakkrrkkklsgeqLleevwseieewlsse....elvvdelvdkdlsrrsgkwldledevdeigleierlilkdLveE 165
                    ss +k +++++ g  +l+evw +i+++l+++    ++++d+++++dlsr  ++w+dl+ e +++g+e+e+li+++L+eE
  VIMSS10104115 754 SSLCK-IHPMPVGYSVLKEVWVRISCYLRYKpydeQQSFDKVMSRDLSRD-DGWMDLQFESECVGIEVEDLIFEELLEE 830
                    55544.5677****************999999****************88.***************************9 PP



Or compare VIMSS10104115 to CDD or PaperBLAST