SwissProt::Q6ZS30 has 2694 amino acids
Query: DUF4704 [M=486]
Accession: PF15787.9
Description: Neurobeachin/BDCP, DUF4704 alpha solenoid region
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.3e-37 114.9 4.0 2.3e-37 114.9 4.0 3.7 3 SwissProt::Q6ZS30
Domain annotation for each sequence (and alignments):
>> SwissProt::Q6ZS30
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -4.2 0.4 0.29 0.29 299 357 .. 66 124 .. 62 150 .. 0.63
2 ? -0.9 0.2 0.031 0.031 405 437 .. 293 325 .. 231 407 .. 0.57
3 ! 114.9 4.0 2.3e-37 2.3e-37 18 320 .. 859 1173 .. 854 1291 .. 0.81
Alignments for each domain:
== domain 1 score: -4.2 bits; conditional E-value: 0.29
DUF4704 299 aiRllaLkllgklllrspvkrksevmeaknlfsliserLllfseeltdktynvLfevll 357
+ R++ L+++ k+ + +++ ++ + f+++ ++L+ +e t + n+ + +
SwissProt::Q6ZS30 66 VLRIQLLQCVQKMADGLEEQQQALSILLVKFFIILCRNLSNVEEIGTCSYINYVITMTT 124
56888888888888888877777777777777777777777775555555555544444 PP
== domain 2 score: -0.9 bits; conditional E-value: 0.031
DUF4704 405 kiLsdllvLlksnrenrrallqmsvWqewLval 437
+iL++ Ll+s +++ + +W++ ++al
SwissProt::Q6ZS30 293 TILENYFKLLNSDHSALPNQRRSRQWENRFIAL 325
456666666666655555555555555444443 PP
== domain 3 score: 114.9 bits; conditional E-value: 2.3e-37
DUF4704 18 vvthsiqsilesvGGiqvLfPLfsqldqaeedeqlege..........................seadeklcatlleliaelleesetnq 81
vv +i++i++++GG +vLfPL++q+ + +e + e++ s + +l+at + ++++ ++ ++ nq
SwissProt::Q6ZS30 859 VVNWDIKDIINCIGGLNVLFPLLEQISHFSEGQIPEEKnestvpesvtpvegdwlvwtstkaseSRLERNLVATFILIVKHFIQRHPINQ 948
78889***********************99987555557789*******************9999999********************** PP
DUF4704 82 qqllrlkGflvlsflLqsvspkhLtlevlsalksllkvlkslanselLlkdlvdsillnpklWiytdyeVQkeLysyLatdfvsdkkilt 171
+l++++G++ l+ lLq+v+++ + ++vl a++ l++++ sl ++ +Ll+++ +++l+++++W + d+ +yL+t++ ++ ++
SwissProt::Q6ZS30 949 GNLIHSHGVATLGALLQKVPSTLMDVNVLMAVQLLIEQV-SLEKNMQLLQQMYQYLLFDFRIWNRGDFPFRIGHIQYLSTIIKDSRRV-- 1035
**************************************9.6668***************************************99866.. PP
DUF4704 172 nlrrvstVlrlldilkqfYwvenaksksgvtskslleeRpsqeeilklrallLslieqlvrksseisesevkalinyletvqddenvedv 261
r+ +V+ lld+l+ +Y ++ s ++i ++r l li+ + k+ s +e+++++ y++ ++++e++ +
SwissProt::Q6ZS30 1036 -FRKKYGVQFLLDTLRIYYGNGC-----KYN-------ELSLDDIRTIRTSLYGLIKYFLCKG--GSHEEIQSIMGYIAATNEEEQLFGI 1110
.89999999**********8652.....222.......33678********************..99*********************** PP
DUF4704 262 Lelvirllseks...asflealdskggieiflkLLsre..seaiRllaLkllgklllrspvkrk 320
L+ + +ll ++ + fl ++ g +i+ LL ++ s R + k++ ++l+ v
SwissProt::Q6ZS30 1111 LDVLFSLLRTSPtrgQLFLLLFEP-GNADILYALLLNQkySDRLREIIFKIMEQMLKCTNVYER 1173
**********99895666666655.556777777755411566677788999888875554332 PP
Or compare SwissProt::Q6ZS30 to CDD or PaperBLAST