SwissProt::Q8NFP9 has 2946 amino acids
Query: DUF4704 [M=486]
Accession: PF15787.9
Description: Neurobeachin/BDCP, DUF4704 alpha solenoid region
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-187 608.7 10.6 6.8e-187 608.1 10.6 1.3 1 SwissProt::Q8NFP9
Domain annotation for each sequence (and alignments):
>> SwissProt::Q8NFP9
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 608.1 10.6 6.8e-187 6.8e-187 2 486 .] 468 947 .. 467 947 .. 0.99
Alignments for each domain:
== domain 1 score: 608.1 bits; conditional E-value: 6.8e-187
DUF4704 2 advhspealilngvqlvvthsiqsilesvGGiqvLfPLfsqldqaeedeqlegeseadeklcatlleliaelleesetnqqqllrlkGflvl 93
++vhsp+al+l++v+++vthsi+s+++s+GGiqvLfPLf+qld+ + ++ s++++++catll ++ ell++s ++q+q+l +kGflv+
SwissProt::Q8NFP9 468 IFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLDNRQLND-----SQVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVI 554
799****************************************999886.....35889********************************* PP
DUF4704 94 sflLqsvspkhLtlevlsalksllkvlkslanselLlkdlvdsillnpklWiytdyeVQkeLysyLatdfvsdkkiltnlrrvstVlrlldi 185
++lL+++s+ h+t+ vl++++s +k+l+ l+++ +Llk+l+d+il+np++Wi+t+ +VQ +Ly+yL+ +f+ + +i+t++rrv tVl+l+++
SwissProt::Q8NFP9 555 GYLLEKSSRVHITRAVLEQFLSFAKYLDGLSHGAPLLKQLCDHILFNPAIWIHTPAKVQLSLYTYLSAEFIGTATIYTTIRRVGTVLQLMHT 646
******************************************************************************************** PP
DUF4704 186 lkqfYwvenaksksgvtskslleeRpsqeeilklrallLslieqlvrksseisesevkalinyletvqddenvedvLelvirllseksasfl 277
lk++Ywv n+ +sg+t+k+l+++Rpsq+ei++lra++L +++ql++k +++e+e+++++nyl t+++den++dvL+l+++l+se++as++
SwissProt::Q8NFP9 647 LKYYYWVINPADSSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTMHEDENIHDVLQLLVALMSEHPASMI 738
******************************************************************************************** PP
DUF4704 278 ealdskggieiflkLLsreseaiRllaLkllgklllrspvkrksevmeaknlfsliserLllfseeltdktynvLfevllekaspkivlekh 369
+a+d+++gi+++ kLL+++se i ++aLk+lg++l+++ +krk e+m++++lf+l++erL+l+++++t +tyn+L+e+l+e++ +++v + h
SwissProt::Q8NFP9 739 PAFDQRNGIRVIYKLLASKSESIWVQALKVLGYFLKHLGHKRKVEIMHTHSLFTLLGERLMLHTNTVTVTTYNTLYEILTEQVCTQVVHKPH 830
******************************************************************************************** PP
DUF4704 370 sepekssklelPqilkviakllsqskdses.ielrkkiLsdllvLlksnrenrrallqmsvWqewLvalaklaeikeeeeseikelvielfk 460
ep++++k+++P+ilkv+a+ll++s++s++ +e+r+++Lsd++ L++++renrr+llq svWq+w+++l +++++++ee ++i+e+v+++f+
SwissProt::Q8NFP9 831 PEPDSTVKIQNPMILKVVATLLKNSTPSAElMEVRRLFLSDMIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPKNSEE-QKITEMVYNIFR 921
*******************************************************************************.************ PP
DUF4704 461 vLlvhalktekgGwrvlvdtlailhs 486
+Ll+ha+k+e+gGwrv+vdtl+i+hs
SwissProt::Q8NFP9 922 ILLYHAIKYEWGGWRVWVDTLSIAHS 947
***********************996 PP
Or compare SwissProt::Q8NFP9 to CDD or PaperBLAST