Align SwissProt::Q9EPN1 to PF15787 (DUF4704)

SwissProt::Q9EPN1 has 2936 amino acids

Query:       DUF4704  [M=486]
Accession:   PF15787.9
Description: Neurobeachin/BDCP, DUF4704 alpha solenoid region
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
     8e-187  607.8  10.3   1.2e-186  607.2  10.3    1.3  1  SwissProt::Q9EPN1  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q9EPN1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  607.2  10.3  1.2e-186  1.2e-186       2     486 .]     458     937 ..     457     937 .. 0.99

  Alignments for each domain:
  == domain 1  score: 607.2 bits;  conditional E-value: 1.2e-186
            DUF4704   2 advhspealilngvqlvvthsiqsilesvGGiqvLfPLfsqldqaeedeqlegeseadeklcatlleliaelleesetnqqqllrlkGflvl 93 
                        ++vhsp+al+l++v+++vthsi+s+++s+GGiqvLfPLf+qld+ + ++     s++++++catll ++ ell++s ++q+q+l +kGflv+
  SwissProt::Q9EPN1 458 IFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLDNRQLND-----SQVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVI 544
                        799****************************************999886.....35889********************************* PP

            DUF4704  94 sflLqsvspkhLtlevlsalksllkvlkslanselLlkdlvdsillnpklWiytdyeVQkeLysyLatdfvsdkkiltnlrrvstVlrlldi 185
                        ++lL+++s+ h+t+ vl++++s +k+l+ l+++ +Llk+l+d+il+np++Wi+t+ +VQ +Ly+yL+ +f+ + +i+t++rrv tVl+l+++
  SwissProt::Q9EPN1 545 GYLLEKSSRVHITRAVLEQFLSFAKYLDGLSHGAPLLKQLCDHILFNPAIWIHTPAKVQLSLYTYLSAEFIGTATIYTTIRRVGTVLQLMHT 636
                        ******************************************************************************************** PP

            DUF4704 186 lkqfYwvenaksksgvtskslleeRpsqeeilklrallLslieqlvrksseisesevkalinyletvqddenvedvLelvirllseksasfl 277
                        lk++Ywv n+  +sg+++k+l+++Rpsq+ei++lra++L +++ql++k  +++e+e+++++nyl t+++den++dvL+l+++l+se++as++
  SwissProt::Q9EPN1 637 LKYYYWVINPADSSGIAPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTMHEDENIHDVLQLLVALMSEHPASMI 728
                        ******************************************************************************************** PP

            DUF4704 278 ealdskggieiflkLLsreseaiRllaLkllgklllrspvkrksevmeaknlfsliserLllfseeltdktynvLfevllekaspkivlekh 369
                        +a+d+++gi+++ kLL+++se i ++aLk+lg++l+++ +krk e+m++++lf+l++erL+l+++++t +tyn+L+e+l+e++ +++v + h
  SwissProt::Q9EPN1 729 PAFDQRNGIRVIYKLLASKSESIWVQALKVLGYFLKHLGHKRKVEIMHTHSLFTLLGERLMLHTNTVTVTTYNTLYEILTEQVCTQVVHKPH 820
                        ******************************************************************************************** PP

            DUF4704 370 sepekssklelPqilkviakllsqskdses.ielrkkiLsdllvLlksnrenrrallqmsvWqewLvalaklaeikeeeeseikelvielfk 460
                         ep++++k+++P+ilkv+a+ll++s++s++ +e+r+++Lsd++ L++++renrr+llq svWq+w+++l +++++++ee ++i+e+v+++f+
  SwissProt::Q9EPN1 821 PEPDSTVKIQNPMILKVVATLLKNSTPSAElMEVRRLFLSDMIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPKSSEE-QKITEMVYNIFR 911
                        *******************************************************************************.************ PP

            DUF4704 461 vLlvhalktekgGwrvlvdtlailhs 486
                        +Ll+ha+k+e+gGwrv+vdtl+i+hs
  SwissProt::Q9EPN1 912 ILLYHAIKYEWGGWRVWVDTLSIAHS 937
                        ***********************996 PP

Or compare SwissProt::Q9EPN1 to CDD or PaperBLAST