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Align XP_645593.1 to PF15787 (DUF4704)

XP_645593.1 has 2806 amino acids

Query:       DUF4704  [M=486]
Accession:   PF15787.9
Description: Neurobeachin/BDCP, DUF4704 alpha solenoid region
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-30   92.6  35.1    1.4e-18   53.0   4.6    5.1  5  XP_645593.1  


Domain annotation for each sequence (and alignments):
>> XP_645593.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.4   0.0   1.4e-06   1.4e-06       7      44 ..     364     401 ..     360     415 .. 0.88
   2 !   53.0   4.6   1.4e-18   1.4e-18      49     258 ..     488     736 ..     479     752 .. 0.76
   3 !   47.5   0.6   6.4e-17   6.4e-17     274     483 ..     789    1106 ..     784    1109 .. 0.88
   4 ?   -6.4   3.2         1         1     341     381 ..    1643    1683 ..    1621    1686 .. 0.73
   5 ?   -6.9   3.1         1         1     358     396 ..    1766    1804 ..    1765    1808 .. 0.78

  Alignments for each domain:
  == domain 1  score: 13.4 bits;  conditional E-value: 1.4e-06
      DUF4704   7 pealilngvqlvvthsiqsilesvGGiqvLfPLfsqld 44 
                   +a  +++ ++ +t si+++++ +GG+q++fPL++ ++
  XP_645593.1 364 INAFSIGDLKIFSTFSIKDSIYLIGGPQIIFPLLQAIE 401
                  56777889999***********************9776 PP

  == domain 2  score: 53.0 bits;  conditional E-value: 1.4e-18
      DUF4704  49 deqlegeseadeklcatlleliaelleesetnqqqllrlkGflvlsflLqsv.......spkhLtlevlsa..lksllkvlkslan......selLlk 131
                  d ++ ++  +++   + +l++i++ll + + nq++l+ ++G+++l++l  ++       +++  + ++l++  +  ++++l++l++      ++lL  
  XP_645593.1 488 DINQLSK-LINYPRISSILRFITHLLINDKYNQKELIGSNGLSLLGYLISNIfsnsdsnPSHPYNFKTLEReeFDLIFDALDQLTDfslvdkNPLLKL 584
                  4444444.677777899*****************************9998763333332233467788764336677788877744445665777778 PP

      DUF4704 132 dlvdsillnpklWiytdyeVQkeLysyLatdfvsdkkiltnlrrvstVlrlldilkqfYwvena.......................ksksgvtsksl 206
                  ++ ++i++n+++W++ + e Q +L+  ++ ++ +++   +  r+ + V  lld +k+fY  ++                        +++++  ++++
  XP_645593.1 585 NIYKEIIFNFNIWVHIKKEYQIQLFNLIIFKVSQNP---QYFRENIKVRYLLDCIKYFYHINENtiistnnnnnnnnigessgannnNNNNNNNTNNV 679
                  89999***********************99999998...5578877888***********98888999999888888888888777644444444445 PP

      DUF4704 207 leeRp....sqeeilklrallLslieqlvrks.seisesevkalinyletvqddenv 258
                   + R     s++++ ++ ++++ +i+ +++   +e +  e++ +i+++++++ +  v
  XP_645593.1 680 GNCRLnchlSNQDLKEIISYIFDIIKIIIKPIlNEKEVPEIQEIIKFIQDSECNSTV 736
                  554434445999**************9998766778999999999999887755544 PP

  == domain 3  score: 47.5 bits;  conditional E-value: 6.4e-17
      DUF4704  274 asflealdskggieiflkLLsreseaiRllaLkllgklllrspvkrks.........evmeaknlfs.liserLllfseeltdktynvLfevllek 359 
                   + fl++++s+g i+ +l LL++++e + +l  k++gk +  s   +           +++++ + ++  i+++L+ f+  +t+ +y+ L e+++++
  XP_645593.1  789 KGFLNSFESSGDIKSLLGLLKHNNEQVQVLVIKIIGKYMGGSEGLSMAssgnvrrslKLKNTLTDVLyFITDQLMEFE--MTELMYRGLSEIVVDE 882 
                   6699**********************************9998776666688999988555554444447*********..**************** PP

      DUF4704  360 aspkivlekhsepeks.................................................sklelPqilkviakllsqskdsesielrkki 406 
                   ++p+i  + +s+  +                                                   ++ + + l++i +l   +       l++ki
  XP_645593.1  883 ITPSIADTPNSPLLELlgsetlladsissvnimggsnnnnnnnnnnsnnnkdkidsnnkdkdskeKRIINIAALETICRLAIRAPL----ALQQKI 974 
                   ****77766666665577778888889999999999999999********************999899999999999998766554....689*** PP

      DUF4704  407 LsdllvLlksnrenrrallqmsvWqewLvalaklaei.........................................................ke 445 
                   L+++l  +k+ ++ r  +l+ ++Wq+wL++l     +                                                         ++
  XP_645593.1  975 LNEILLCIKHLPQMRAGILDSENWQHWLLSLWPQPRSntssppwsppisplltstksmspspppppplssssyqqqqqniisdhrsqtkeqlsiRA 1070
                   ******************************998877789999****************************99999999999888877666666555 PP

      DUF4704  446 eeeseikelvielfkvLlvhalktekgGwrvlvdtlai 483 
                   ++ s ike+   ++kvLl+  + + k+Gw+ +++t a 
  XP_645593.1 1071 YQ-SGIKEILTGIMKVLLFDCI-NKKDGWKFIEETEAW 1106
                   55.*******************.9**********9775 PP

  == domain 4  score: -6.4 bits;  conditional E-value: 1
      DUF4704  341 seeltdktynvLfevllekaspkivlekhsepekssklelP 381 
                   +++l ++ ++ L    + +  +++ ++++++++++ +l+lP
  XP_645593.1 1643 QQQLRMEQQQQLRLEQQQQKLQQQQQQQQQQQQSQQSLQLP 1683
                   33588888888887777788888888888888888888888 PP

  == domain 5  score: -6.9 bits;  conditional E-value: 1
      DUF4704  358 ekaspkivlekhsepekssklelPqilkviakllsqskd 396 
                   ++  +++ +++h++++++ +++    l +  +ll++s+ 
  XP_645593.1 1766 NQHQQQQAQQQHQQQQQQHQFKRSTSLSANQTLLNTSST 1804
                   566788999999999999999988888888888877765 PP



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