PaperBLAST – Find papers about a protein or its homologs

 

Align NP_001275512.1 to PF15875 (DUF4731)

NP_001275512.1 has 78 amino acids

Query:       DUF4731  [M=75]
Accession:   PF15875.9
Description: Domain of unknown function (DUF4731)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      8e-46  140.5   0.1    8.9e-46  140.4   0.1    1.0  1  NP_001275512.1  


Domain annotation for each sequence (and alignments):
>> NP_001275512.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  140.4   0.1   8.9e-46   8.9e-46       1      75 []       3      77 ..       3      77 .. 1.00

  Alignments for each domain:
  == domain 1  score: 140.4 bits;  conditional E-value: 8.9e-46
         DUF4731  1 pqessvqYsrWdessrDevsvaavssteeasslkriyqklctGklgialkvlggvalfwvvfilGYvtGyyvhkC 75
                    pqes+v+YsrW++ srD vs+ avssteeas+++ri+q+lctGklgia+kvlggvalfw++filGY+tGyyvhkC
  NP_001275512.1  3 PQESHVHYSRWEDGSRDGVSLGAVSSTEEASRCRRISQRLCTGKLGIAMKVLGGVALFWIIFILGYLTGYYVHKC 77
                    89************************************************************************* PP



Or compare NP_001275512.1 to CDD or PaperBLAST