VIMSS130549 has 776 amino acids
Query: DUF4962 [M=476]
Accession: PF16332.9
Description: Domain of unknown function (DUF4962)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.3e-45 139.5 0.0 9.8e-45 138.9 0.0 1.2 1 VIMSS130549
Domain annotation for each sequence (and alignments):
>> VIMSS130549
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 138.9 0.0 9.8e-45 9.8e-45 53 449 .. 50 452 .. 44 464 .. 0.85
Alignments for each domain:
== domain 1 score: 138.9 bits; conditional E-value: 9.8e-45
DUF4962 53 kvkYkvrlaqdkef..kkevikaeqeWavynlekklkkGkWyWqyayvkkde...keewsevlqfevkdkaaklkpPslkevlaklkksHPrilllkk 145
++Y +r+++d+ f kk ++ + +W ++ + ++l +G+++W ya ++++ + +ws v++fe+++ k P a ++sHPr++l+++
VIMSS130549 50 GARYVLRISTDPGFtdKKTLVFEDLAWNFFTPDEALPDGHYHWCYALWDQKSataHSNWSTVRSFEISEALPKTPLPGRSARHAAAQTSHPRLWLNSE 147
579***********74455555699**********************76655112568********************99999*************** PP
DUF4962 146 dwedfikrnkdnpeakayikkaekllkkpleklereidttgvkkldnevqkkslltresrkivdkeeaniealvraY.lLtkDkkyakeaikrllell 242
+ f +++p++ + + ek ++ le++ + ++ + +l ++++ + + + i++l++a +L +D ++ + k ll ++
VIMSS130549 148 QLSAFADAVAKDPNHCGWAEFYEKSVEPWLERPVMPEPQPYPNN----TRVATLWRQMYIDCQE-VIYAIRHLAIAGrVLGRD-DLLDASRKWLLAVA 239
***************99999999999999998866554444444....4777778888888765.556788888886156666.578999999***** PP
DUF4962 243 smdkskavkgDFnaat...llsllalaYDsfYdllteeekkllkkeikergkkiykefvnrlenhi..adnHvWqmtlRiltlaalavvgelpeAdkW 335
++d a+ +n+ + ++ +la+ YD Yd l+e+e++++++++ er++++ ++ + h+ d H lt a +a+ ge +eA +W
VIMSS130549 240 AWDTKGATSRAYNDEAgfrVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHVfpYDSHAVRSLSAVLTPACIALQGESDEAGEW 337
***777777778876433388999************************************9999994459**************************** PP
DUF4962 336 ldyvYevWvaRfPvL.nkDGgWHngdsYfkvnlrtlievpalyselsGvdfFsdpWyknlalyvlysqppfsksagnGdshenllkpnkkrvly.adA 431
ldy+ e + + ++DGgW +g Y+ + lie ++l + G+d ++ p+++n++ + ly++ p + a +Gd +l ++ + + +y +
VIMSS130549 338 LDYTVEFLATLYSPWaGTDGGWAEGPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTKAPGTRRANFGDDS-TLGDLPGLKLGYnVRQ 434
******9998885555**************************************************************975.4445555555552456 PP
DUF4962 432 Larkvnnpyaaayvkeil 449
a ++n + ++y +i+
VIMSS130549 435 FAGVTGNGHYQWYFDHIK 452
677777777777776665 PP
Or compare VIMSS130549 to CDD or PaperBLAST