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Align VIMSS10270444 to PF16473 (Rv2179c-like)

VIMSS10270444 has 1227 amino acids

Query:       Rv2179c-like  [M=177]
Accession:   PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    2.2e-10   26.7   0.1    2.3e-09   23.3   0.1    2.5  2  VIMSS10270444  


Domain annotation for each sequence (and alignments):
>> VIMSS10270444  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   0.0     0.044     0.044      74     105 ..     461     492 ..     452     515 .. 0.71
   2 !   23.3   0.1   2.3e-09   2.3e-09       2     174 ..     827     991 ..     826     994 .. 0.72

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.044
   Rv2179c-like  74 kddaksledalkeleefieenedakslkvwgn 105
                    +d      ++l++l++++ + +++ +l v   
  VIMSS10270444 461 DDPEAERTHVLRQLRDWLDDGAERSDLAVLTR 492
                    555666789*********88888888877655 PP

  == domain 2  score: 23.3 bits;  conditional E-value: 2.3e-09
   Rv2179c-like   2 hlmiDiEtlgne.etaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefieened 96 
                    ++m+D+E + ++   + +++IGa ++   +G + ++F + v+l ++ +a+++ +  T+       + a      d+a++  d++ ++ +f      
  VIMSS10270444 827 YVMVDLEATSTDpRHCRVAEIGALKV--RDGTVVDRFSELVQLPEDLTADERETLRTVCG----LDPA---SDFDEARPEADVWADFCDFAD---- 909
                    69*********9889*********66..5**************99987775544444432....2222...1124478999*********93.... PP

   Rv2179c-like  97 akslkvwgngasfDnviLraafelagleipwkfwndrdvrTlvelake.lglekkrdipfe......gvkhnAlddAkhqakivs 174
                      +  v  ng+++D+++Lr++ + +  ++ w    d  + +  el ++  ++++  ++         +++h Al+d + q +i++
  VIMSS10270444 910 -TAPLVAHNGQRYDFRVLRRLANTHEADARWATTYDL-LPAAHELFPDlRRYDAA-HLRETlldddaDTAHRALADCEDQQRILA 991
                    .3445677999**********9999888888765543.45556666553333322.22211233567999*******99999987 PP



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