VIMSS10279782 has 300 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-12 33.4 0.1 6.2e-12 31.7 0.1 1.8 1 VIMSS10279782
Domain annotation for each sequence (and alignments):
>> VIMSS10279782
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 31.7 0.1 6.2e-12 6.2e-12 3 167 .. 132 281 .. 130 288 .. 0.76
Alignments for each domain:
== domain 1 score: 31.7 bits; conditional E-value: 6.2e-12
Rv2179c-like 3 lmiDiEtlgne.etaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefieeneda 97
++iDiEt g + ++ +i++IGav++dp++ e eF v++++ +++++ + + +ell+ d k l+ +l+e+ +fi
VIMSS10279782 132 VVIDIETDGLDeNENSIIEIGAVKIDPSQLE---EFNYLVKYDKILP--KQISKL---------TGISQELLDRDGKDLQVVLQEFLNFIG----- 208
78*****998857889**************8...********87754..445554.........46899******9**************5..... PP
Rv2179c-like 98 kslkvwgngasfDnviLraafelagleipwkfwndrdvrTlvelakelglekkrdipfe........gvkhnAlddAk 167
+ ++g+g++fD++ +++ ++ + ++p ++r ++ ++ +ke + ++++++ +v h Al+d k
VIMSS10279782 209 -NHDLVGYGINFDIKFINKKLKEL--NQP--LLKNRVYDLMQYAKKEKLFLDNYKLQTVlkayeiedEVPHRALHDSK 281
.666****************8885..555..45666666666666553332222222222244455689999999976 PP
Or compare VIMSS10279782 to CDD or PaperBLAST