VIMSS1117407 has 239 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.6e-12 31.2 0.0 4.6e-11 28.9 0.0 1.9 1 VIMSS1117407
Domain annotation for each sequence (and alignments):
>> VIMSS1117407
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 28.9 0.0 4.6e-11 4.6e-11 2 171 .. 3 161 .. 2 166 .. 0.79
Alignments for each domain:
== domain 1 score: 28.9 bits; conditional E-value: 4.6e-11
Rv2179c-like 2 hlmiDiEtlgne..etaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefieened 96
++++D+Et+g + + +v+IG v + + +G++F++ +++e ++ ++a + + +l d+ + + +++ e+ efi
VIMSS1117407 3 EIVLDTETTGLDplRGDRLVEIGCVEMF-NRMPTGQTFHRYINPERDMPQEAF-----------AVHGLSSDFLADK-PLFAHVVDEFLEFI----- 81
5899*******977899********763.3344567***********975522...........2234456666555.99************..... PP
Rv2179c-like 97 akslkvwgngasfDnviLraafelagleipwkfwndrdvrTlvelake.lglekkrdipfe........gvkhnAlddAkhqak 171
+ ++ ++asfD++ ++a +++++ + + +dr v+Tl +++ g++++ d + +kh Al dA+ a+
VIMSS1117407 82 -GDAPLVIHNASFDISFINAELDRLKRQ---AIGRDRLVDTLLLARRKhPGVSNRLDDLCSryaidnsrRTKHGALLDAELLAE 161
.6889*******************7544...469********99997756775555544444667778899********98776 PP
Or compare VIMSS1117407 to CDD or PaperBLAST