VIMSS1866766 has 301 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.9e-10 25.9 0.0 3e-09 23.0 0.0 2.2 1 VIMSS1866766
Domain annotation for each sequence (and alignments):
>> VIMSS1866766
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 23.0 0.0 3e-09 3e-09 3 173 .. 131 287 .. 129 291 .. 0.67
Alignments for each domain:
== domain 1 score: 23.0 bits; conditional E-value: 3e-09
Rv2179c-like 3 lmiDiEtlgne.etaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefieenedak 98
+++DiEt+g + e+ ai++IGav+ p+ e e+F + v+++ +T+ k +el+ ++ +sl++a+++l++f
VIMSS1866766 131 VALDIETTGLDaERDAIIAIGAVKG-PSVNE-TEKFTTLVNPRRPL-------PSTVA---KLTGLSAEELVANG-ISLSEAVQALRDFT------G 208
689******998999********54.55555.799******96654.......34443...22333455677666.99************......7 PP
Rv2179c-like 99 slkvwgngasfDnviLraafelagleipwkfwn.drdvrTlvela......ke.lglekkrdipfegvkhnAlddAkhqakiv 173
sl ++g++ +fD+ L+aa + +gl+ +f n + d+ lv+ + + + + ++++i ++ h+Al dA + + ++
VIMSS1866766 209 SLPLVGYNLRFDMGFLSAAGRETGLT---SFGNqTFDLLPLVKKSsrfldnYKlSTVLAHYQIDN-EQPHHALSDATATMALA 287
9******************8886664...222202233344433322222111112233333333.699*******9877665 PP
Or compare VIMSS1866766 to CDD or PaperBLAST