VIMSS19798 has 350 amino acids
Query: Rv2179c-like [M=177] Accession: PF16473.9 Description: 3'-5' exoribonuclease Rv2179c-like domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.4e-12 31.9 0.4 3.3e-11 29.3 0.0 2.2 2 VIMSS19798 Domain annotation for each sequence (and alignments): >> VIMSS19798 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -3.7 0.2 0.46 0.46 54 63 .. 9 18 .. 5 52 .. 0.78 2 ! 29.3 0.0 3.3e-11 3.3e-11 4 176 .. 111 266 .. 108 267 .. 0.75 Alignments for each domain: == domain 1 score: -3.7 bits; conditional E-value: 0.46 Rv2179c-like 54 daeTikWWlk 63 ++ + +WW++ VIMSS19798 9 NKRAWMWWFQ 18 5667788875 PP == domain 2 score: 29.3 bits; conditional E-value: 3.3e-11 Rv2179c-like 4 miDiEtlgne.etaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefieenedaks 99 +iD+Et+g+ + +i++IGav + Ge+ ++F++ v+++s ++ ae ++ T ++ l +a+s+++al+el+ f+ + VIMSS19798 111 FIDLETTGSCpIKHEILEIGAVQ--VKGGEIINRFETLVKVKSVPDYIAELTGIT-----------YEDTL--NAPSAHEALQELRLFL------GN 186 8********97899********5..5699************99988886666655...........34444..4889************......57 PP Rv2179c-like 100 lkvwgngasfDnviLraafelagleipwkfwndrdvrTlvelake.lglekkrdipfe......gvkhnAlddAkhqakivsai 176 +++++a+fD L ++f +l++p + ++ Tl ++++ l+++ + + +e +v h A +dA + k+++ + VIMSS19798 187 SVFVAHNANFDYNFLGRYFVE-KLHCPLL---NLKLCTLDLSKRAiLSMRYSLSFLKEllgfgiEVSHRAYADALASYKLFEIC 266 789**************9988.5777733...3334444444444333333333333344444789********9999988765 PP
Or compare VIMSS19798 to CDD or PaperBLAST