VIMSS26461 has 215 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-11 30.9 0.3 1e-10 27.7 0.3 2.1 1 VIMSS26461
Domain annotation for each sequence (and alignments):
>> VIMSS26461
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 27.7 0.3 1e-10 1e-10 4 175 .. 17 175 .. 14 177 .. 0.75
Alignments for each domain:
== domain 1 score: 27.7 bits; conditional E-value: 1e-10
Rv2179c-like 4 miDiEtlgne.etaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefieenedaks 99
+ D+Et+g + e+ i++IGav+fd +G + ++F + + ++ ++ + ++ + + +l + ++ + ++++++++fi k
VIMSS26461 17 AFDTETTGLKaEEDRIIEIGAVTFD-RKG-IIARFSTLIFPDRAIPPD-----------VSKINHITDDMLVN-KPRFCEIVSDFSRFI------KG 93
57******9979999*********9.888.5789*******9998766...........22334444444433.47899**********......68 PP
Rv2179c-like 100 lkvwgngasfDnviLraafelagleipwkfwndrdvrTlvela...kelgl.ekkrdipfe...gvkhnAlddAkhqakivsa 175
+ +++++a+fD+ L+a ++l+ ++p +++ + + +++ ++ ++ +++f +h A ddA+ +++++++
VIMSS26461 94 TVLVAHNANFDVEFLNAELSLC-KKQPLSHKVVDTYAMAQAVFpglGRHQYrLQNLALQFGltvHAAHRAEDDARVCMELFTT 175
99*******************8.556666666666655555552222223323455666668888899999999999988776 PP
Or compare VIMSS26461 to CDD or PaperBLAST