VIMSS54820 has 247 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-09 23.8 0.0 5.8e-09 22.0 0.0 1.8 1 VIMSS54820
Domain annotation for each sequence (and alignments):
>> VIMSS54820
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 22.0 0.0 5.8e-09 5.8e-09 3 174 .. 13 177 .. 11 181 .. 0.72
Alignments for each domain:
== domain 1 score: 22.0 bits; conditional E-value: 5.8e-09
Rv2179c-like 3 lmiDiEtlgne.......etaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefie 92
+++D+Et+g++ e+ i++IGav + + +G +F+ +++ +++ + +++ + + e+lkd+ + ++d+ +e+ +fi
VIMSS54820 13 VVLDTETTGMNreggphyEGHRIIEIGAVEII-NRKLTGRHFHVYLKPDRDIQLE-AIEVHG----------ITDEFLKDK-PEYKDVHEEFVDFI- 95
6799***998876777777889*******995.4444688********9999766.445444..........468899777.89************. PP
Rv2179c-like 93 enedakslkvwgngasfDnviLraafelagle..ipwkfwndrdvrTlvelake.lglekkrdipfe....gvkhnAlddAkhqakivs 174
k ++++++a fD+ +++ f ++g f ++ d ++ ++ g +++ di +e ++ h +l+ A a+i++
VIMSS54820 96 -----KGAELVAHNAPFDVGFMDYEFAKLGGAigKTSDFCKVTDTLAMA--KRIfPGKRNNLDILCErygiDNSHRTLHGALLDAEILA 177
.....6899*******************887622334555555544444..33323345566677777777566666666655555554 PP
Or compare VIMSS54820 to CDD or PaperBLAST