VIMSS576294 has 217 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2e-11 30.0 0.1 7.1e-11 28.2 0.1 1.8 1 VIMSS576294
Domain annotation for each sequence (and alignments):
>> VIMSS576294
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 28.2 0.1 7.1e-11 7.1e-11 4 173 .. 18 172 .. 15 176 .. 0.73
Alignments for each domain:
== domain 1 score: 28.2 bits; conditional E-value: 7.1e-11
Rv2179c-like 4 miDiEtlgneeta.aivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefieenedaks 99
+ D+Et+g+e++a +v+IG v+fd+ G + +++ +d+e+ + + + +++ e+l ++ + + ++l ++ +fi ++
VIMSS576294 18 AFDTETTGTEAKAeRVVEIGCVKFDI-RG-VIARYNVLIDPEKPMPPE-----------AGKVNQITDEMLAGQ-PKFAEVLPDFLDFI------RN 94
57********66526*********95.45.4589**********9866...........235567777888666.88************......57 PP
Rv2179c-like 100 lkvwgngasfDnviLraafelagle.ipwkfwndrdv..rTlvelakelglekkrdipfe...gvkhnAlddAkhqakiv 173
+ +++++asfD+ ++ +e++g + + k++++ + +Tl l++ ++ +++f ++h A ddA+ +++ +
VIMSS576294 95 TVLVAHNASFDINFINCELERCGKTkLTNKVFDTLTFarETLPGLQSYA--LQNLATQFGvqaVNAHRAEDDARVCMEFF 172
88*******************9986444444433332113444444221..334445554556899*******9998765 PP
Or compare VIMSS576294 to CDD or PaperBLAST