WP_004112679.1 has 359 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.2e-13 34.6 0.1 5.8e-12 31.8 0.1 2.2 1 WP_004112679.1
Domain annotation for each sequence (and alignments):
>> WP_004112679.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 31.8 0.1 5.8e-12 5.8e-12 1 174 [. 177 349 .. 177 352 .. 0.74
Alignments for each domain:
== domain 1 score: 31.8 bits; conditional E-value: 5.8e-12
Rv2179c-like 1 nhlmiDiEtlgne.etaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefieen 94
n ++iD Et+g + + +i++IGav+f +G+ eeF++ +++++++ + + +++ i + + +++l++ l+ al+e+ +f+
WP_004112679.1 177 NFVVIDCETTGLNsKVDKIIEIGAVKFI--DGK-IEEFQKLININCDSVSNFN-KNNFIPNEIIELTGITSNMLESYGVGLDLALREFIDFV--- 264
5689*******9945568*********8..897.68********999544433.33333333444567778888888999************... PP
Rv2179c-like 95 edakslkvwgngasfDnviLraafelagle..ipwkfwndrdvrTlvela......kelgl.ekkrdipfe...gvkhnAlddAkhqakivs 174
+l + g++ sfD+ +++a+ ++ + +++ ++ d++ v+++ +l++ +++ + v h Al dA+ a++v
WP_004112679.1 265 ---GKLPLLGYNVSFDIGFFNSALFSLDEKlsSAFSVNKVIDISRFVKHDrrflknYQLKTvLHEY----NiseSVPHRALLDARLTARLVL 349
...79****************998776665436788888889999998884433221122213333....14448*************9986 PP
Or compare WP_004112679.1 to CDD or PaperBLAST