XP_005174272.1 has 244 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.3e-12 31.9 0.0 8.5e-12 31.3 0.0 1.4 1 XP_005174272.1
Domain annotation for each sequence (and alignments):
>> XP_005174272.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 31.3 0.0 8.5e-12 8.5e-12 3 151 .. 58 197 .. 56 230 .. 0.79
Alignments for each domain:
== domain 1 score: 31.3 bits; conditional E-value: 8.5e-12
Rv2179c-like 3 lmiDiEtlgne.etaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefieened 96
++ D+Et+g + ++++iv+++a+ +G + F ++++++ g +++ T W r+ ++ + ++al+ + +f+++++
XP_005174272.1 58 VFFDLETTGLDtSRCDIVQLSAI-----SGA--QVFSVYLLPRCCITEG--ASQVTGLWVDGSTLMLRERPVQTV--PHQQALTGFIRFLQNQTF 141
789******9989**********.....675..89***********999..889999999999999999999655..99***********88887 PP
Rv2179c-like 97 akslkvwgngasfDnviLraafelagleipwkfwndrdvrTlvelake.lglekkr 151
+ + v n+ +fD+ iLr+++e gl + ++ ++v+Tl +++ + +k
XP_005174272.1 142 GRPILVGHNSRRFDWPILRRVLEEFGLLQEFRSCASECVDTLSLSREMfRNALQKF 197
78888888999*******************************98884322222232 PP
Or compare XP_005174272.1 to CDD or PaperBLAST