biolip::8fycK has 164 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.2e-14 39.7 0.2 1.6e-13 36.9 0.2 1.9 1 biolip::8fycK
Domain annotation for each sequence (and alignments):
>> biolip::8fycK
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 36.9 0.2 1.6e-13 1.6e-13 2 168 .. 3 153 .. 2 161 .. 0.75
Alignments for each domain:
== domain 1 score: 36.9 bits; conditional E-value: 1.6e-13
Rv2179c-like 2 hlmiDiEtlgne.etaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefieened 96
+++iDiEt g++ ++ i++IGa+ +e+G+ +F a ++ ++ ++ + + a+ll+++ + +++l++++efi
biolip::8fycK 3 YVVIDIETDGKDaKRNHILEIGAI--RCEDGK-ETHFTALISGDAVPPSI------------TKLTGITATLLQKEGQEEKKVLTAFREFI----- 78
589********98999********..999**7.68899999986664322............344667899**99999*************..... PP
Rv2179c-like 97 akslkvwgngasfDnviLraafelagleipwkfwndrdvrTlvelakelglekkrdipfe......gvkhnAlddAkh 168
+ ++g+ sfD+ Lr+af++ gl + +++d+ +v+ ++ + + k +++ + +v h Al dA+
biolip::8fycK 79 -GDDDLVGYHVSFDIEFLRQAFKKYGLGYL--KNKTHDLLRIVKKEQLFQADYKLETSLQsygihkKVPHRALGDAEL 153
.5778*******************766533..3444555555555533333444444443667777999******986 PP
Or compare biolip::8fycK to CDD or PaperBLAST