biolip::8h18A has 172 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-14 40.2 0.1 1e-13 37.5 0.1 1.9 1 biolip::8h18A
Domain annotation for each sequence (and alignments):
>> biolip::8h18A
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 37.5 0.1 1e-13 1e-13 3 168 .. 6 156 .. 4 164 .. 0.74
Alignments for each domain:
== domain 1 score: 37.5 bits; conditional E-value: 1e-13
Rv2179c-like 3 lmiDiEtlgne.etaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefieeneda 97
++iDiEt g + ++ +i++IGav+f+ G+ eeF a +++e++ i + + + ++ll+++ + l+++l+e+ fi
biolip::8h18A 6 VVIDIETDGLDeKKNTIIEIGAVKFN---GQQVEEFNALIKYEEKLPPT-------I----FKLTGISKSLLDQEGRDLKEVLSEFLLFI------ 81
79*****998768999*********9...77778********9986433.......3....35567899****999**************...... PP
Rv2179c-like 98 kslkvwgngasfDnviLraafelagleipwkfwndrdv.rTlvela.....kelglekkrdipfe....gvkhnAlddAkh 168
+l ++g+++ fD++ +++ +++ gl++ + +++d+ r +++ + +l++ k+ v h Al+dA+
biolip::8h18A 82 GDLTLVGYNIHFDIQFINNKLNKFGLPLL--INKTHDImRYVKDEKlfldnYQLQTALKS----YgiedSVPHRALKDARL 156
6899****************999766544..44555540333333333321223332222....1344589********86 PP
Or compare biolip::8h18A to CDD or PaperBLAST