PaperBLAST – Find papers about a protein or its homologs

 

Align WP_003856558.1 to PF18367 (Rv2175c_C)

WP_003856558.1 has 123 amino acids

Query:       Rv2175c_C  [M=56]
Accession:   PF18367.5
Description: Rv2175c C-terminal domain of unknown function
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.1e-30   89.4   0.1    9.3e-30   88.8   0.1    1.3  1  WP_003856558.1  


Domain annotation for each sequence (and alignments):
>> WP_003856558.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.8   0.1   9.3e-30   9.3e-30       4      56 .]      70     122 ..      68     122 .. 0.98

  Alignments for each domain:
  == domain 1  score: 88.8 bits;  conditional E-value: 9.3e-30
       Rv2175c_C   4 LpGtltvLrDgGfddeeilrWLFteDesLpgrPidALregrkrEVkRrAqalA 56 
                     +pG++++L+DgGf+deeil++LFteDe+LpgrPidAL+ + +rEV+RrAqa+A
  WP_003856558.1  70 IPGVIALLADGGFSDEEILAFLFTEDETLPGRPIDALHGQLAREVMRRAQAMA 122
                     79**************************************************9 PP



Or compare WP_003856558.1 to CDD or PaperBLAST