PaperBLAST – Find papers about a protein or its homologs

 

Align WP_011609029.1 to TIGR00001

WP_011609029.1 has 65 amino acids

Query:       TIGR00001  [M=63]
Accession:   TIGR00001
Description: rpmI_bact: ribosomal protein bL35
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.7e-27   79.9   9.0    7.3e-27   79.8   9.0    1.0  1  WP_011609029.1  


Domain annotation for each sequence (and alignments):
>> WP_011609029.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   9.0   7.3e-27   7.3e-27       1      63 []       2      64 ..       2      64 .. 0.99

  Alignments for each domain:
  == domain 1  score: 79.8 bits;  conditional E-value: 7.3e-27
       TIGR00001  1 pKmKTkkaaaKRFkvtgsGkikrkkagkrHlltkKsskrkRqLrkkalvsksdlkrvkllLpy 63
                    pK+KT ++aaKRFk+t+sG +krk++  rH+ltkK++krkR+Lr+k++v+k+d   v ++Lpy
  WP_011609029.1  2 PKIKTLRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKADQVLVVACLPY 64
                    9************************************************************98 PP



Or compare WP_011609029.1 to CDD or PaperBLAST