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Family Search for PF01169 (UPF0016)

PF01169.19 hits 20 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

NP_035756 transmembrane protein 165 precursor from Mus musculus
2 alignments in 98:311 / 323 (46.1%), covering up to 98.7% of PF01169, 150.1 bits

NP_997848 transmembrane protein 165 precursor from Danio rerio
2 alignments in 78:293 / 305 (48.9%), covering up to 98.7% of PF01169, 150.1 bits

TM165_HUMAN / Q9HC07 Transmembrane protein 165; Transmembrane protein PT27; Transmembrane protein TPARL from Homo sapiens (Human) (see 4 papers)
NP_060945 transmembrane protein 165 precursor from Homo sapiens
2 alignments in 98:312 / 324 (46.0%), covering up to 98.7% of PF01169, 149.0 bits

AT1G25520 hypothetical protein (RefSeq) from Arabidopsis thaliana
2 alignments in 9:220 / 230 (65.2%), covering up to 98.7% of PF01169, 145.7 bits

AT1G68650 hypothetical protein (RefSeq) from Arabidopsis thaliana
2 alignments in 9:218 / 228 (65.8%), covering up to 98.7% of PF01169, 144.5 bits

SO_1071 membrane protein of unknown function UPF0016 from Shewanella oneidensis MR-1
2 alignments in 5:178 / 184 (82.6%), covering up to 98.7% of PF01169, 139.3 bits

VC0022 conserved hypothetical protein (NCBI ptt file) from Vibrio cholerae O1 biovar eltor str. N16961
NP_229681 hypothetical protein from Vibrio cholerae O1 biovar El Tor str. N16961
2 alignments in 21:194 / 200 (76.5%), covering up to 98.7% of PF01169, 139.1 bits

PpSQ1_03570 TMEM165/GDT1 family protein from Pseudomonas putida
2 alignments in 6:179 / 194 (78.4%), covering up to 100.0% of PF01169, 138.7 bits

PAM71_ARATH / Q94AX5 Protein PAM71, chloroplastic; CA(2+)/H(+) ANTIPORTER 1; GDT1-like protein 1; PHOTOSYNTHESIS AFFECTED MUTANT71 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
AT1G64150 hypothetical protein (RefSeq) from Arabidopsis thaliana
2 alignments in 160:361 / 370 (43.2%), covering up to 98.7% of PF01169, 138.4 bits

MNEA_VIBC3 / A0A0H3AJF5 Putative manganese exporter; Manganese exporter A from Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) (see paper)
2 alignments in 21:194 / 200 (76.5%), covering up to 98.7% of PF01169, 138.4 bits

PA71H_ARATH / Q9T0H9 Protein PAM71-homolog, chloroplastic; GDT1-like protein 2; PHOTOSYNTHESIS AFFECTED MUTANT71-homolog from Arabidopsis thaliana (Mouse-ear cress) (see paper)
AT4G13590 hypothetical protein (RefSeq) from Arabidopsis thaliana
2 alignments in 147:351 / 359 (43.2%), covering up to 98.7% of PF01169, 137.4 bits

VDA_003255 TMEM165/GDT1 family protein from Photobacterium damselae subsp. damselae CIP 102761
2 alignments in 5:178 / 185 (82.7%), covering up to 98.7% of PF01169, 137.1 bits

GDT1_YEAST / P38301 GCR1-dependent translation factor 1 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 3 papers)
NP_009746 putative ribosome biosynthesis protein GDT1 from Saccharomyces cerevisiae S288C
YBR187W Gdt1p (RefSeq) from Saccharomyces cerevisiae
2 alignments in 43:268 / 280 (53.6%), covering up to 98.7% of PF01169, 136.6 bits

SPAC17G8.08c human TMEM165 homolog (RefSeq) from Schizosaccharomyces pombe
2 alignments in 51:278 / 287 (52.3%), covering up to 98.7% of PF01169, 135.7 bits

Psest_3226 TMEM165/GDT1 family protein from Pseudomonas stutzeri RCH2
2 alignments in 5:179 / 195 (77.9%), covering up to 97.3% of PF01169, 135.1 bits

YLY5_SCHPO / Q9P7Q0 GDT1-like protein C186.05c from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
SPAC186.05c human TMEM165 homolog (RefSeq) from Schizosaccharomyces pombe
2 alignments in 28:254 / 262 (57.3%), covering up to 98.7% of PF01169, 130.0 bits

CNE04690 vacuole protein (RefSeq) from Cryptococcus neoformans var. neoformans JEC21
2 alignments in 15:284 / 302 (49.7%), covering up to 100.0% of PF01169, 128.4 bits

Rv3848 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN (NCBI) from Mycobacterium tuberculosis H37Rv
2 alignments in 6:180 / 302 (49.7%), covering up to 98.7% of PF01169, 123.8 bits

AFUA_3G07080 UPF0016 domain protein, putative from Aspergillus fumigatus Af293
2 alignments in 255:532 / 541 (31.2%), covering up to 100.0% of PF01169, 123.3 bits

SCO2347 integral membrane protein (NCBI) from Streptomyces coelicolor A3(2)
2 alignments in 8:183 / 193 (77.7%), covering up to 97.3% of PF01169, 117.9 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory