PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF01205 (UPF0029)

PF01205.19 hits 37 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

IMPCT_XENLA / Q9W625 Protein IMPACT; Imprinted and ancient gene protein homolog; Ximpact from Xenopus laevis (African clawed frog) (see paper)
Aligns to 179:286 / 312 (34.6%), covers 100.0% of PF01205, 119.0 bits

IMPCT_HUMAN / Q9P2X3 Protein IMPACT; Imprinted and ancient gene protein homolog from Homo sapiens (Human) (see 2 papers)
NP_060909 protein IMPACT from Homo sapiens
Aligns to 182:289 / 320 (33.8%), covers 100.0% of PF01205, 118.1 bits

XP_011245152 protein IMPACT isoform X1 from Mus musculus
Aligns to 163:270 / 300 (36.0%), covers 100.0% of PF01205, 117.5 bits

IMPCT_MOUSE / O55091 Protein IMPACT; Imprinted and ancient gene protein from Mus musculus (Mouse) (see 6 papers)
Aligns to 181:288 / 318 (34.0%), covers 100.0% of PF01205, 117.4 bits

YD177_YEAST / Q12257 IMPACT family member YDL177C from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
YDL177C Putative protein of unknown function; similar to the mouse IMPACT gene; YDL177C is not an essential gene (RefSeq) from Saccharomyces cerevisiae
Aligns to 21:163 / 170 (84.1%), covers 100.0% of PF01205, 117.0 bits

lmo2516 similar to conserved hypothetical proteins (NCBI ptt file) from Listeria monocytogenes EGD-e
Aligns to 19:124 / 211 (50.2%), covers 99.0% of PF01205, 116.7 bits

Q5GFD9 Protein IMPACT from Rattus norvegicus
Aligns to 180:287 / 317 (34.1%), covers 100.0% of PF01205, 116.5 bits

SAUSA300_0732 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus USA300_FPR3757
Aligns to 19:124 / 213 (49.8%), covers 99.0% of PF01205, 115.6 bits

SA0703 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus N315
Aligns to 19:124 / 213 (49.8%), covers 99.0% of PF01205, 115.6 bits

BSU35510 hypothetical protein (RefSeq) from Bacillus subtilis subsp. subtilis str. 168
P32437 IMPACT family member YvyE from Bacillus subtilis (strain 168)
Aligns to 19:124 / 217 (48.8%), covers 98.1% of PF01205, 114.6 bits

LLKF_1118 hypothetical protein (RefSeq) from Lactococcus lactis subsp. lactis KF147
Aligns to 16:121 / 209 (50.7%), covers 100.0% of PF01205, 114.4 bits

G7SDH9 Uncharacterized protein from Streptococcus suis D12
Aligns to 18:123 / 210 (50.5%), covers 99.0% of PF01205, 113.7 bits

spr2014 Conserved hypothetical protein (NCBI ptt file) from Streptococcus pneumoniae R6
Aligns to 17:122 / 211 (50.2%), covers 98.1% of PF01205, 113.7 bits

SPAC27E2.02 IMPACT homolog (RefSeq) from Schizosaccharomyces pombe
Aligns to 153:259 / 280 (38.2%), covers 99.0% of PF01205, 112.7 bits

cgd2_2430 ximpact ortholog conserved protein seen in bacteria and eukaryotes from Cryptosporidium parvum Iowa II
Aligns to 145:265 / 290 (41.7%), covers 100.0% of PF01205, 112.1 bits

T551_03102 hypothetical protein from Pneumocystis jirovecii RU7
Aligns to 143:249 / 267 (40.1%), covers 100.0% of PF01205, 111.3 bits

BH3630 hypothetical protein (NCBI) from Bacillus halodurans C-125
Aligns to 19:124 / 213 (49.8%), covers 99.0% of PF01205, 111.2 bits

YIH1_YEAST / P25637 Protein IMPACT homolog from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 7 papers)
NP_009985 Yih1p from Saccharomyces cerevisiae S288C
YCR059C Protein that inhibits activation of Gcn2p, an eIF2 alpha subunit protein kinase, by competing for Gcn1p binding, thus impacting gene expression in response to starvation; has sequence and functional similarity to the mouse IMPACT gene (RefSeq) from Saccharomyces cerevisiae
Aligns to 144:251 / 258 (41.9%), covers 99.0% of PF01205, 110.8 bits

ERH_0029 YigZ family protein from Erysipelothrix rhusiopathiae str. Fujisawa
Aligns to 20:122 / 202 (51.0%), covers 98.1% of PF01205, 107.9 bits

MMB_0718 YigZ family protein from Mycoplasma bovis Hubei-1
Aligns to 11:117 / 126 (84.9%), covers 99.0% of PF01205, 107.5 bits

PNEG_03438 hypothetical protein from Pneumocystis murina B123
Aligns to 143:249 / 270 (39.6%), covers 100.0% of PF01205, 105.2 bits

SCO1302 hypothetical protein (NCBI) from Streptomyces coelicolor A3(2)
Aligns to 19:124 / 208 (51.0%), covers 99.0% of PF01205, 102.5 bits

FTN_0466 hypothetical protein (NCBI) from Francisella tularensis subsp. novicida U112
Aligns to 19:123 / 200 (52.5%), covers 99.0% of PF01205, 102.0 bits

FTA_0467 hypothetical protein (RefSeq) from Francisella tularensis subsp. holarctica FTA
Aligns to 19:123 / 200 (52.5%), covers 99.0% of PF01205, 100.9 bits

P44842 IMPACT family member HI_0722 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Aligns to 18:125 / 206 (52.4%), covers 100.0% of PF01205, 99.8 bits

HI0722 hypothetical protein (NCBI) from Haemophilus influenzae Rd KW20
Aligns to 22:129 / 210 (51.4%), covers 100.0% of PF01205, 99.7 bits

TM1713 proline dipeptidase, putative (NCBI ptt file) from Thermotoga maritima MSB8
Aligns to 17:121 / 191 (55.0%), covers 99.0% of PF01205, 98.6 bits

MHO_1400 hypothetical protein (RefSeq) from Mycoplasma hominis
Aligns to 21:127 / 132 (81.1%), covers 98.1% of PF01205, 98.0 bits

PG0124 conserved hypothetical protein (NCBI) from Porphyromonas gingivalis W83
Aligns to 20:125 / 206 (51.5%), covers 100.0% of PF01205, 97.9 bits

Q9JXA1 UPF0029 domain-containing protein from Neisseria meningitidis serogroup B (strain MC58)
Aligns to 19:124 / 203 (52.2%), covers 100.0% of PF01205, 97.3 bits

YigZ / b3848 IMPACT family member YigZ from Escherichia coli K-12 substr. MG1655 (see 6 papers)
YIGZ_ECOLI / P27862 IMPACT family member YigZ from Escherichia coli (strain K12) (see paper)
yigZ / RF|NP_418290 IMPACT family member yigZ from Escherichia coli K12 (see paper)
Aligns to 18:125 / 204 (52.9%), covers 100.0% of PF01205, 96.5 bits

Z5370 orf, hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 EDL933
Aligns to 19:126 / 205 (52.7%), covers 100.0% of PF01205, 96.1 bits

SMc01701 CONSERVED HYPOTHETICAL PROTEIN (NCBI ptt file) from Sinorhizobium meliloti 1021
Aligns to 15:115 / 194 (52.1%), covers 99.0% of PF01205, 91.9 bits

P32438 IMPACT family member in pol 5'region (Fragment) from Thermus thermophilus
Aligns to 3:102 / 179 (55.9%), covers 99.0% of PF01205, 91.0 bits

HPYLSS1_01411 YigZ family protein from Helicobacter pylori SS1
Aligns to 15:118 / 190 (54.7%), covers 96.2% of PF01205, 76.2 bits

SPO0940 YigZ family protein from Ruegeria pomeroyi DSS-3
Aligns to 14:115 / 122 (83.6%), covers 100.0% of PF01205, 74.4 bits

SPBC14C8.09c conserved fungal protein (RefSeq) from Schizosaccharomyces pombe
Aligns to 37:138 / 144 (70.8%), covers 93.3% of PF01205, 69.0 bits

Or search for genetic data about PF01205 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory