PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF01868 (UPF0086)

PF01868.16 hits 12 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

RPP29_HUMAN / O95707 Ribonuclease P protein subunit p29; hPOP4; EC 3.1.26.5 from Homo sapiens (Human) (see 2 papers)
NP_006618 ribonuclease P protein subunit p29 from Homo sapiens
Aligns to 128:210 / 220 (37.7%), covers 100.0% of PF01868, 92.4 bits

RNP1_METJA / Q57903 Ribonuclease P protein component 1; RNase P component 1; EC 3.1.26.5; Rpp29 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see 3 papers)
Aligns to 5:87 / 95 (87.4%), covers 98.8% of PF01868, 88.3 bits

CG8038 uncharacterized protein from Drosophila melanogaster
Aligns to 114:196 / 206 (40.3%), covers 97.6% of PF01868, 88.0 bits

RNP1_PYRFU / Q8U007 Ribonuclease P protein component 1; RNase P component 1; EC 3.1.26.5; Rpp29 from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) (see 5 papers)
Aligns to 41:123 / 127 (65.4%), covers 98.8% of PF01868, 86.1 bits

O28362 ribonuclease P (EC 3.1.26.5) from Archaeoglobus fulgidus (see 2 papers)
AF1917 conserved hypothetical protein (NCBI ptt file) from Archaeoglobus fulgidus DSM 4304
Aligns to 8:89 / 102 (80.4%), covers 98.8% of PF01868, 80.8 bits

POP4_YEAST / P38336 RNases MRP/P 32.9 kDa subunit; RNA-processing protein POP4 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 3 papers)
YBR257W Pop4p (RefSeq) from Saccharomyces cerevisiae
Aligns to 171:263 / 279 (33.3%), covers 98.8% of PF01868, 79.9 bits

P14022 Ribonuclease P protein component 1 from Methanococcus vannielii
Aligns to 5:91 / 99 (87.9%), covers 100.0% of PF01868, 79.9 bits

RNP1_SCHPO / Q9P7W9 Probable ribonuclease P protein subunit 1; EC 3.1.26.5 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
Aligns to 121:207 / 217 (40.1%), covers 98.8% of PF01868, 79.0 bits

RNP1_METTH / O26119 Ribonuclease P protein component 1; RNase P component 1; EC 3.1.26.5; Rpp29 from Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum) (see 2 papers)
MTH11 conserved protein (NCBI ptt file) from Methanothermobacter thermautotrophicus str. Delta H
Aligns to 5:88 / 93 (90.3%), covers 98.8% of PF01868, 78.4 bits

RNP1_PYRHO / O59425 Ribonuclease P protein component 1; RNase P component 1; EC 3.1.26.5; Rpp29 from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see 4 papers)
PH1771 hypothetical protein (NCBI ptt file) from Pyrococcus horikoshii OT3
Aligns to 41:122 / 127 (64.6%), covers 98.8% of PF01868, 78.2 bits

RNP1_METMP / P60832 Ribonuclease P protein component 1; RNase P component 1; EC 3.1.26.5; Rpp29 from Methanococcus maripaludis (strain S2 / LL) (see paper)
P60832 ribonuclease P (subunit 2/5) (EC 3.1.26.5) from Methanococcus maripaludis (see paper)
Aligns to 3:88 / 96 (89.6%), covers 100.0% of PF01868, 76.6 bits

AT2G43190 ribonuclease P family protein (RefSeq) from Arabidopsis thaliana
Aligns to 215:292 / 296 (26.4%), covers 90.5% of PF01868, 68.5 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory