PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF01868 (UPF0086)

PF01868.16 hits 13 sequences in PaperBLAST's database above the trusted cutoff. Showing hits to curated sequences only. Or see all hits or try another family.

RPP29_HUMAN / O95707 Ribonuclease P protein subunit p29; hPOP4; EC 3.1.26.5 from Homo sapiens (Human) (see 2 papers)
Aligns to 128:210 / 220 (37.7%), covers 100.0% of PF01868, 92.4 bits

RNP1_METJA / Q57903 Ribonuclease P protein component 1; RNase P component 1; Rpp29; EC 3.1.26.5 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see 3 papers)
Aligns to 5:87 / 95 (87.4%), covers 98.8% of PF01868, 88.3 bits

RNP1_PYRFU / Q8U007 Ribonuclease P protein component 1; RNase P component 1; Rpp29; EC 3.1.26.5 from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) (see 5 papers)
Aligns to 41:123 / 127 (65.4%), covers 98.8% of PF01868, 86.1 bits

O28362 ribonuclease P (EC 3.1.26.5) from Archaeoglobus fulgidus (see 2 papers)
Aligns to 8:89 / 102 (80.4%), covers 98.8% of PF01868, 80.8 bits

POP4_YEAST / P38336 RNases MRP/P 32.9 kDa subunit; RNA-processing protein POP4 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 3 papers)
Aligns to 171:263 / 279 (33.3%), covers 98.8% of PF01868, 79.9 bits

RNP1_SCHPO / Q9P7W9 Probable ribonuclease P protein subunit 1; EC 3.1.26.5 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
Aligns to 121:207 / 217 (40.1%), covers 98.8% of PF01868, 79.0 bits

RNP1_METTH / O26119 Ribonuclease P protein component 1; RNase P component 1; Rpp29; EC 3.1.26.5 from Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum) (see 2 papers)
Aligns to 5:88 / 93 (90.3%), covers 98.8% of PF01868, 78.4 bits

RNP1_PYRHO / O59425 Ribonuclease P protein component 1; RNase P component 1; Rpp29; EC 3.1.26.5 from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see 4 papers)
Aligns to 41:122 / 127 (64.6%), covers 98.8% of PF01868, 78.2 bits

RNP1_METMP / P60832 Ribonuclease P protein component 1; RNase P component 1; Rpp29; EC 3.1.26.5 from Methanococcus maripaludis (strain S2 / LL) (see paper)
P60832 ribonuclease P (subunit 2/5) (EC 3.1.26.5) from Methanococcus maripaludis (see paper)
Aligns to 3:88 / 96 (89.6%), covers 100.0% of PF01868, 76.6 bits

Or search for genetic data about PF01868 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory