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Family Search for PF01973 (MAF_flag10)

PF01973.18 hits 32 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

CAC2168 Uncharacterized conserved protein (NCBI ptt file) from Clostridium acetobutylicum ATCC 824
Aligns to 189:359 / 578 (29.6%), covers 98.8% of PF01973, 179.1 bits

CAC2196 Uncharacterized conserved protein (NCBI ptt file) from Clostridium acetobutylicum ATCC 824
Aligns to 193:360 / 544 (30.9%), covers 98.2% of PF01973, 176.9 bits

CMTB2_07872 hypothetical protein (RefSeq) from Caminibacter mediatlanticus TB-2
Aligns to 206:377 / 631 (27.3%), covers 98.8% of PF01973, 159.0 bits

Cj1337 hypothetical protein Cj1337 (NCBI ptt file) from Campylobacter jejuni subsp. jejuni NCTC 11168
Aligns to 206:382 / 628 (28.2%), covers 98.8% of PF01973, 158.6 bits

CBO2728 hypothetical protein (RefSeq) from Clostridium botulinum A str. ATCC 3502
Aligns to 183:354 / 571 (30.1%), covers 98.8% of PF01973, 158.2 bits

CAC2202 Uncharacterized conserved protein (NCBI ptt file) from Clostridium acetobutylicum ATCC 824
Aligns to 191:362 / 592 (29.1%), covers 98.8% of PF01973, 157.2 bits

Cj1318 hypothetical protein Cj1318 (1318 family) (NCBI ptt file) from Campylobacter jejuni subsp. jejuni NCTC 11168
Cj1335 motility accessory factor (function unknown) (NCBI) from Campylobacter jejuni subsp. jejuni NCTC 11168
Aligns to 217:391 / 649 (27.0%), covers 98.8% of PF01973, 156.9 bits

SO_3273 conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Aligns to 173:339 / 822 (20.3%), covers 98.8% of PF01973, 155.8 bits

YP_001397580 motility accessory factor (RefSeq) from Campylobacter jejuni subsp. doylei 269.97
Aligns to 207:383 / 629 (28.1%), covers 98.8% of PF01973, 155.6 bits

B5D75_RS06380 DUF115 domain-containing protein from Campylobacter jejuni subsp. jejuni
Aligns to 216:392 / 654 (27.1%), covers 98.8% of PF01973, 152.9 bits

Cj1340c hypothetical protein Cj1340c (1318 family) (NCBI ptt file) from Campylobacter jejuni subsp. jejuni NCTC 11168
Aligns to 203:375 / 605 (28.6%), covers 98.8% of PF01973, 150.2 bits

Cj1333 hypothetical protein Cj1333 (1318 family) (NCBI ptt file) from Campylobacter jejuni subsp. jejuni NCTC 11168
Aligns to 212:388 / 653 (27.1%), covers 98.8% of PF01973, 150.1 bits

NAMH_1610 DUF115 domain-containing protein from Nautilia profundicola AmH
Aligns to 208:379 / 643 (26.7%), covers 98.8% of PF01973, 150.0 bits

B5D75_RS06330 DUF115 domain-containing protein from Campylobacter jejuni subsp. jejuni
Aligns to 216:392 / 650 (27.2%), covers 98.8% of PF01973, 149.8 bits

Cj1334 hypothetical prootein Cj1334 (1318 family) (NCBI ptt file) from Campylobacter jejuni subsp. jejuni NCTC 11168
Aligns to 202:378 / 619 (28.6%), covers 99.4% of PF01973, 147.0 bits

SO3259, SO_3259 Flagellar glycosylation protein (Morgan Price) from Shewanella oneidensis MR-1
Aligns to 182:353 / 441 (39.0%), covers 98.8% of PF01973, 144.8 bits

Cj1341c hypothetical protein Cj1341c (1318 family) (NCBI ptt file) from Campylobacter jejuni subsp. jejuni NCTC 11168
Aligns to 203:372 / 607 (28.0%), covers 98.8% of PF01973, 143.9 bits

MPTE_METJA / Q59028 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; HPPK; EC 2.7.6.3; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 6-hydroxymethyl-7,8-dihydropterin diphosphokinase; 6-HMPDK; 7,8-dihydro-6-hydroxymethylpterin diphosphokinase; 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase; PPPK from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see paper)
Q59028 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase (EC 2.7.6.3) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (see 2 papers)
MJ1634 conserved hypothetical protein (NCBI ptt file) from Methanocaldococcus jannaschii DSM 2661
Aligns to 30:199 / 241 (70.5%), covers 98.8% of PF01973, 142.5 bits

HP0114 hypothetical protein (NCBI ptt file) from Helicobacter pylori 26695
Aligns to 206:379 / 628 (27.7%), covers 98.8% of PF01973, 134.7 bits

jhp0106 putative (NCBI ptt file) from Helicobacter pylori J99
Aligns to 205:378 / 627 (27.8%), covers 98.8% of PF01973, 134.6 bits

HMU07160 hypothetical protein (RefSeq) from Helicobacter mustelae 12198
Aligns to 206:379 / 629 (27.7%), covers 98.2% of PF01973, 132.7 bits

TDE1457 conserved hypothetical protein (NCBI) from Treponema denticola ATCC 35405
Aligns to 195:369 / 507 (34.5%), covers 98.8% of PF01973, 127.7 bits

ASA_0374 hypothetical protein (RefSeq) from Aeromonas salmonicida subsp. salmonicida A449
Aligns to 532:703 / 779 (22.1%), covers 98.8% of PF01973, 121.4 bits

Sdel_2228 protein of unknown function DUF115 (RefSeq) from Sulfurospirillum deleyianum DSM 6946
Aligns to 205:378 / 627 (27.8%), covers 98.8% of PF01973, 114.6 bits

amb0685 Uncharacterized protein (NCBI) from Magnetospirillum magneticum AMB-1
Aligns to 247:421 / 666 (26.3%), covers 93.0% of PF01973, 106.9 bits

jhp0417 putative (NCBI ptt file) from Helicobacter pylori J99
Aligns to 258:420 / 631 (25.8%), covers 98.8% of PF01973, 101.5 bits

PAB1706 hypothetical protein (NCBI ptt file) from Pyrococcus abyssi GE5
Aligns to 33:186 / 233 (66.1%), covers 95.3% of PF01973, 101.0 bits

HP0465 conserved hypothetical protein (NCBI ptt file) from Helicobacter pylori 26695
Aligns to 258:420 / 631 (25.8%), covers 98.8% of PF01973, 100.4 bits

MPTE_PYRFU / Q8U2A9 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; HPPK; EC 2.7.6.3; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 6-hydroxymethyl-7,8-dihydropterin diphosphokinase; 6-HMPDK; 7,8-dihydro-6-hydroxymethylpterin diphosphokinase; 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase; PPPK from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) (see paper)
PF0930 hypothetical protein (NCBI ptt file) from Pyrococcus furiosus DSM 3638
Aligns to 31:186 / 231 (67.5%), covers 95.9% of PF01973, 93.9 bits

PH1244 hypothetical protein (NCBI ptt file) from Pyrococcus horikoshii OT3
Aligns to 66:219 / 266 (57.9%), covers 95.9% of PF01973, 93.5 bits

TP0175 T. pallidum predicted coding region TP0175 (NCBI ptt file) from Treponema pallidum subsp. pallidum str. Nichols
Aligns to 99:194 / 210 (45.7%), covers 43.9% of PF01973, 70.9 bits

AF0878 conserved hypothetical protein (NCBI ptt file) from Archaeoglobus fulgidus DSM 4304
Aligns to 57:172 / 197 (58.9%), covers 67.8% of PF01973, 52.0 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory