PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF02656 (DUF202)

PF02656.15 hits 17 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

Rv2272 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 17:84 / 122 (55.7%), covers 98.5% of PF02656, 64.4 bits

YidH / b3676 conserved inner membrane protein YidH from Escherichia coli K-12 substr. MG1655 (see 2 papers)
Aligns to 13:80 / 115 (59.1%), covers 98.5% of PF02656, 59.6 bits

FGR18 putative uncharacterized protein from Candida albicans (see paper)
Aligns to 1:80 / 120 (66.7%), covers 92.6% of PF02656, 59.2 bits

XP_846013 vacuolar transporter chaperone, putative from Trypanosoma brucei brucei TREU927
Aligns to 62:127 / 180 (36.7%), covers 95.6% of PF02656, 58.5 bits

cg0135 putative inner membrane protein (RefSeq) from Corynebacterium glutamicum ATCC 13032
Aligns to 21:88 / 122 (55.7%), covers 98.5% of PF02656, 57.2 bits

VTC1_SCHPO / Q9UR17 Vacuolar transporter chaperone 1; Negative regulator of cdc42 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
nrf1 GTPase regulator Nrf1 from Schizosaccharomyces pombe (see 3 papers)
Aligns to 24:86 / 122 (51.6%), covers 98.5% of PF02656, 53.9 bits

VTC1_YEAST / P40046 Vacuolar transporter chaperone 1; Negative regulator of CDC42 protein 1; Phosphate metabolism protein 4 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 5 papers)
YER072W Vacuolar transporter chaperon (VTC) involved in distributing V-ATPase and other membrane proteins; together with other VTC proteins, forms a heterotetrameric complex that associates with the SNARE Nyv1p and the V0 sector of the V-ATPase (RefSeq) from Saccharomyces cerevisiae
Aligns to 24:86 / 129 (48.8%), covers 97.1% of PF02656, 53.4 bits

XP_001690865 vacuolar transport chaperone-like protein from Chlamydomonas reinhardtii
Aligns to 45:119 / 158 (47.5%), covers 97.1% of PF02656, 49.8 bits

AFUA_2G09040, Afu2g09040 vacuolar transporter chaperone (Vtc4), putative from Aspergillus fumigatus Af293
Aligns to 677:740 / 801 (8.0%), covers 97.1% of PF02656, 48.2 bits

cg0136 hypothetical protein (RefSeq) from Corynebacterium glutamicum ATCC 13032
Aligns to 6:71 / 105 (62.9%), covers 95.6% of PF02656, 47.8 bits

Rv2273 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 10:73 / 109 (58.7%), covers 98.5% of PF02656, 47.5 bits

An12g04710 vacuolar transporter chaperone 4 from Aspergillus niger CBS 513.88
Aligns to 688:751 / 808 (7.9%), covers 97.1% of PF02656, 45.9 bits

VTC2_YEAST / P43585 Vacuolar transporter chaperone 2; Phosphate metabolism protein 1 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 5 papers)
YFL004W Vacuolar membrane protein involved in vacuolar polyphosphate accumulation; functions as a regulator of vacuolar H+-ATPase activity and vacuolar transporter chaperones; involved in protein localization and non-autophagic vacuolar fusion (RefSeq) from Saccharomyces cerevisiae
Aligns to 686:752 / 828 (8.1%), covers 97.1% of PF02656, 44.3 bits

VTC3_YEAST / Q02725 Vacuolar transporter chaperone 3; Phosphate metabolism protein 2 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 5 papers)
YPL019C Vacuolar membrane protein involved in vacuolar polyphosphate accumulation; functions as a regulator of vacuolar H+-ATPase activity and vacuolar transporter chaperones; involved in non-autophagic vacuolar fusion (RefSeq) from Saccharomyces cerevisiae
Aligns to 698:765 / 835 (8.1%), covers 97.1% of PF02656, 42.9 bits

CNAG_01263 vacuolar transporter chaperone 4 from Cryptococcus neoformans var. grubii H99
Aligns to 762:829 / 864 (7.9%), covers 98.5% of PF02656, 40.8 bits

YidG / b3675 putative inner membrane protein from Escherichia coli K-12 substr. MG1655 (see 2 papers)
Aligns to 12:74 / 120 (52.5%), covers 82.4% of PF02656, 39.0 bits

VTC4_YEAST / P47075 Vacuolar transporter chaperone 4; Phosphate metabolism protein 3 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 5 papers)
NP_012522 Vtc4p from Saccharomyces cerevisiae S288C
NP_012522, YJL012C Vacuolar membrane protein involved in vacuolar polyphosphate accumulation; functions as a regulator of vacuolar H+-ATPase activity and vacuolar transporter chaperones; involved in non-autophagic vacuolar fusion (RefSeq) from Saccharomyces cerevisiae
Aligns to 622:684 / 721 (8.7%), covers 97.1% of PF02656, 36.4 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory