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Family Search for PF02696 (UPF0061)

PF02696.14 hits 14 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

FMP40_YEAST / Q08968 UPF0061 protein FMP40 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 4 papers)
YPL222W Fmp40p (RefSeq) from Saccharomyces cerevisiae
Aligns to 48:649 / 688 (87.5%), covers 99.6% of PF02696, 561.1 bits

c2102 Hypothetical protein ydiU (NCBI ptt file) from Escherichia coli CFT073
Aligns to 1:451 / 478 (94.4%), covers 99.1% of PF02696, 523.7 bits

YdiU / b1706 UPF0061 family protein YdiU from Escherichia coli K-12 substr. MG1655 (see 3 papers)
ydiU / RF|NP_416221 UPF0061 protein ydiU from Escherichia coli K12 (see paper)
b1706 hypothetical protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
Aligns to 1:451 / 478 (94.4%), covers 99.1% of PF02696, 521.6 bits

PA5023 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 3:457 / 486 (93.6%), covers 98.9% of PF02696, 502.9 bits

Galf_2424 YdiU family protein from Gallionella capsiferriformans ES-2
Aligns to 18:486 / 518 (90.5%), covers 97.6% of PF02696, 454.4 bits

NP_196807 selenoprotein O from Arabidopsis thaliana
AT5G13030 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 114:601 / 633 (77.1%), covers 96.2% of PF02696, 450.8 bits

An07g10280 YdiU domain protein from Aspergillus niger CBS 513.88
Aligns to 68:603 / 637 (84.1%), covers 95.9% of PF02696, 433.7 bits

SPAC20G4.05c UPF0061 family protein (RefSeq) from Schizosaccharomyces pombe
Aligns to 35:534 / 568 (88.0%), covers 98.3% of PF02696, 423.4 bits

MGG_03159 YdiU domain-containing protein from Magnaporthe oryzae 70-15
Aligns to 106:661 / 705 (78.9%), covers 95.9% of PF02696, 420.1 bits

BP1090 conserved hypothetical protein (NCBI) from Bordetella pertussis Tohama I
Aligns to 5:458 / 487 (93.2%), covers 98.1% of PF02696, 410.7 bits

SELO_HUMAN / Q9BVL4 Selenoprotein O; SelO from Homo sapiens (Human) (see paper)
NP_113642 selenoprotein O from Homo sapiens
Aligns to 76:624 / 669 (82.1%), covers 95.5% of PF02696, 406.6 bits

RSP_2375 hypothetical protein (NCBI) from Rhodobacter sphaeroides 2.4.1
Aligns to 1:451 / 481 (93.8%), covers 98.7% of PF02696, 391.7 bits

thalar_00489 YdiU family protein from Litoreibacter arenae DSM 19593
Aligns to 2:442 / 471 (93.6%), covers 98.1% of PF02696, 355.2 bits

CC3334 conserved hypothetical protein, interruption (NCBI ptt file) from Caulobacter crescentus CB15
Aligns to 8:160 / 160 (95.6%), covers 30.3% of PF02696, 163.1 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory