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Family Search for PF03235 (DUF262)

PF03235.14 hits 29 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

HP1397 hypothetical protein (NCBI ptt file) from Helicobacter pylori 26695
Aligns to 7:227 / 271 (81.5%), covers 98.6% of PF03235, 140.3 bits

HP1409 hypothetical protein (NCBI ptt file) from Helicobacter pylori 26695
HP0426 hypothetical protein (NCBI ptt file) from Helicobacter pylori 26695
Aligns to 11:236 / 578 (39.1%), covers 99.1% of PF03235, 135.3 bits

c5426 Conserved hypothetical protein (NCBI ptt file) from Escherichia coli CFT073
Aligns to 15:226 / 557 (38.1%), covers 99.5% of PF03235, 134.5 bits

jhp1301 putative (NCBI ptt file) from Helicobacter pylori J99
Aligns to 8:235 / 314 (72.6%), covers 96.4% of PF03235, 133.4 bits

Cj0008 hypothetical protein Cj0008 (NCBI ptt file) from Campylobacter jejuni subsp. jejuni NCTC 11168
Aligns to 10:260 / 583 (43.1%), covers 98.2% of PF03235, 130.9 bits

NMA2230 hypothetical protein (NCBI ptt file) from Neisseria meningitidis Z2491
Aligns to 11:243 / 571 (40.8%), covers 98.6% of PF03235, 129.6 bits

K747_06625 DUF262 domain-containing protein from Helicobacter pylori UM032
Aligns to 6:218 / 689 (30.9%), covers 96.8% of PF03235, 127.9 bits

cg0841 hypothetical protein (RefSeq) from Corynebacterium glutamicum ATCC 13032
Aligns to 8:222 / 811 (26.5%), covers 99.5% of PF03235, 126.8 bits

NP_463839 similar to unknown protein (NCBI ptt file) from Listeria monocytogenes EGD-e
Aligns to 3:239 / 553 (42.9%), covers 95.5% of PF03235, 124.1 bits

BCAL1172 hypothetical protein (RefSeq) from Burkholderia cenocepacia J2315
Aligns to 7:234 / 590 (38.6%), covers 95.5% of PF03235, 124.0 bits

EF62_1081 DUF262 domain-containing protein from Enterococcus faecalis 62
Aligns to 12:265 / 583 (43.6%), covers 99.5% of PF03235, 119.6 bits

jhp0174 putative (NCBI ptt file) from Helicobacter pylori J99
Aligns to 5:214 / 567 (37.0%), covers 99.5% of PF03235, 116.9 bits

SCO5329 hypothetical protein (NCBI) from Streptomyces coelicolor A3(2)
Aligns to 12:239 / 565 (40.4%), covers 99.1% of PF03235, 116.5 bits

jhp0873 putative (NCBI ptt file) from Helicobacter pylori J99
Aligns to 4:264 / 291 (89.7%), covers 97.3% of PF03235, 110.6 bits

UU527 conserved hypothetical (NCBI ptt file) from Ureaplasma parvum serovar 3 str. ATCC 700970
Aligns to 307:527 / 971 (22.8%), covers 97.7% of PF03235, 109.9 bits

jhp0955 putative (NCBI ptt file) from Helicobacter pylori J99
Aligns to 6:209 / 217 (94.0%), covers 95.0% of PF03235, 103.6 bits

WP_081445540 DUF262 domain-containing protein from Actinomyces odontolyticus F0309
Aligns to 63:231 / 405 (41.7%), covers 95.9% of PF03235, 101.6 bits

Z5949 orf; conserved hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 EDL933
Aligns to 8:93 / 94 (91.5%), covers 34.4% of PF03235, 96.1 bits

MW0374 hypothetical protein (NCBI ptt file) from Staphylococcus aureus subsp. aureus MW2
Aligns to 6:213 / 608 (34.2%), covers 93.7% of PF03235, 95.4 bits

SCO6638 hypothetical protein (NCBI) from Streptomyces coelicolor A3(2)
Aligns to 9:254 / 605 (40.7%), covers 99.5% of PF03235, 88.9 bits

A0A023I190 6-hydroxypseudooxynicotine oxidase from Shinella sp. HZN7 (see paper)
Aligns to 16:235 / 562 (39.1%), covers 96.8% of PF03235, 80.9 bits

HP0513 hypothetical protein (NCBI ptt file) from Helicobacter pylori 26695
Aligns to 1:173 / 658 (26.3%), covers 82.4% of PF03235, 80.2 bits

alr1266 hypothetical protein (NCBI ptt file) from Nostoc sp. PCC 7120
Aligns to 10:181 / 599 (28.7%), covers 92.3% of PF03235, 68.6 bits

BanLI Type II restriction enzyme recognizing RTCAGG, ?; CCTGAY from Bifidobacterium animalis subsp. lactis CNCM I-2494
Aligns to 12:121 / 372 (29.6%), covers 32.1% of PF03235, 63.5 bits

EKO11_3023 DUF262 domain-containing protein from Escherichia coli KO11FL
Aligns to 14:172 / 593 (26.8%), covers 95.9% of PF03235, 63.4 bits

VCA0199 hypothetical protein (NCBI ptt file) from Vibrio cholerae O1 biovar eltor str. N16961
Aligns to 260:412 / 638 (24.0%), covers 94.1% of PF03235, 60.6 bits

STM14_2479 DUF262 domain-containing protein from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
Aligns to 31:162 / 171 (77.2%), covers 28.1% of PF03235, 56.0 bits

HP0938 hypothetical protein (NCBI ptt file) from Helicobacter pylori 26695
Aligns to 5:81 / 115 (67.0%), covers 22.2% of PF03235, 50.5 bits

Z5950 orf; conserved hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 EDL933
Aligns to 5:121 / 452 (25.9%), covers 37.1% of PF03235, 42.3 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory