PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF03649 (UPF0014)

PF03649.13 hits 11 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

Teth39_1957 hypothetical protein (RefSeq) from Thermoanaerobacter ethanolicus ATCC 33223
Aligns to 3:240 / 250 (95.2%), covers 99.6% of PF03649, 286.6 bits

TM0193 conserved hypothetical protein (NCBI ptt file) from Thermotoga maritima MSB8
Aligns to 9:255 / 263 (93.9%), covers 99.6% of PF03649, 276.6 bits

YbbM / b0491 putative iron ABC exporter membrane subunit FetB from Escherichia coli K-12 substr. MG1655 (see 3 papers)
FETB_ECOLI / P77307 Probable iron export permease protein FetB from Escherichia coli (strain K12) (see paper)
NP_415024 iron export ABC transporter permease; peroxide resistance protein from Escherichia coli str. K-12 substr. MG1655
b0491 putative metal resistance protein (VIMSS) from Escherichia coli str. K-12 substr. MG1655
Aligns to 8:245 / 259 (91.9%), covers 99.2% of PF03649, 273.6 bits

VV1373 ABC-type uncharacterized transport system, permease component (NCBI) from Vibrio vulnificus YJ016
Aligns to 39:280 / 294 (82.3%), covers 99.2% of PF03649, 242.1 bits

Sb09g001990 No description from Sorghum bicolor
Aligns to 32:269 / 282 (84.4%), covers 98.3% of PF03649, 241.9 bits

STAR2_ORYSJ / Q5W7C1 UPF0014 membrane protein STAR2; Protein SENSITIVE TO ALUMINUM RHIZOTOXICITY 2 from Oryza sativa subsp. japonica (Rice) (see 2 papers)
Aligns to 34:271 / 285 (83.5%), covers 98.3% of PF03649, 230.0 bits

ALS3_ARATH / Q9ZUT3 Protein ALUMINUM SENSITIVE 3; ABC transporter I family member 16; ABC transporter ABCI.16; AtABCI16; ybbM homolog protein from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
NP_181270 aluminum sensitive 3 from Arabidopsis thaliana
AT2G37330 ALS3 (ALUMINUM SENSITIVE 3) (RefSeq) from Arabidopsis thaliana
Aligns to 22:259 / 273 (87.2%), covers 98.3% of PF03649, 224.9 bits

SA2242 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus N315
Aligns to 3:241 / 258 (92.6%), covers 99.6% of PF03649, 220.2 bits

SACOL2461 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus COL
Aligns to 3:241 / 258 (92.6%), covers 99.6% of PF03649, 220.1 bits

SAR2543 putative membrane protein (NCBI) from Staphylococcus aureus subsp. aureus MRSA252
Aligns to 3:241 / 258 (92.6%), covers 99.6% of PF03649, 215.9 bits

Rv3000 POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN (NCBI) from Mycobacterium tuberculosis H37Rv
MT3080 ABC transporter, ATP-binding protein (NCBI) from Mycobacterium tuberculosis CDC1551
Aligns to 107:203 / 219 (44.3%), covers 38.0% of PF03649, 109.3 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory