PaperBLAST – Find papers about a protein or its homologs


Family Search for PF03661 (UPF0121)

PF03661.13 hits 6 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

TMM33_HUMAN / P57088 Transmembrane protein 33; Protein DB83; SHINC-3 from Homo sapiens (Human) (see 3 papers)
NP_060596 transmembrane protein 33 from Homo sapiens
Aligns to 7:245 / 247 (96.8%), covers 96.7% of PF03661, 319.8 bits

KRH2_DROME / Q9V447 Krueppel homolog 2; Protein Kr-h2 from Drosophila melanogaster (Fruit fly) (see paper)
Aligns to 31:268 / 276 (86.2%), covers 97.5% of PF03661, 300.4 bits

CNAG_02753 endoplasmic reticulum protein from Cryptococcus neoformans var. grubii H99
Aligns to 6:248 / 278 (87.4%), covers 80.9% of PF03661, 132.8 bits

TTS1_SCHPO / Q9Y7Z5 Tetra-spanning protein 1 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
tts1 tetra spanning protein 1, Tts1 from Schizosaccharomyces pombe (see 4 papers)
NP_596818 tetra-spanning protein 1 from Schizosaccharomyces pombe
SPBC1539.04 conserved eukaryotic protein (RefSeq) from Schizosaccharomyces pombe
Aligns to 6:258 / 279 (90.7%), covers 93.4% of PF03661, 120.5 bits

POM33_YEAST / Q12164 Pore membrane protein of 33 kDa from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
NP_013077 nucleoporin POM33 from Saccharomyces cerevisiae S288C
YLL023C Protein of unknown function; may interact with ribosomes, based on co-purification experiments; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum (RefSeq) from Saccharomyces cerevisiae
Aligns to 15:265 / 279 (90.0%), covers 93.8% of PF03661, 86.2 bits

AT3G02420 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 113:327 / 348 (61.8%), covers 72.6% of PF03661, 59.1 bits

Or search for genetic data about PF03661 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory