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Family Search for PF04402 (SIMPL)

PF04402.14 hits 24 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YP_002826772 outer membrane protein from Sinorhizobium fredii NGR234
Aligns to 53:257 / 261 (78.5%), covers 100.0% of PF04402, 166.6 bits

BH11510 Outer membrane protein (NCBI) from Bartonella henselae str. Houston-1
Aligns to 42:242 / 245 (82.0%), covers 100.0% of PF04402, 160.3 bits

BMEI0536 PERIPLASMIC IMMUNOGENIC PROTEIN (NCBI ptt file) from Brucella melitensis 16M
Aligns to 40:247 / 250 (83.2%), covers 100.0% of PF04402, 159.2 bits

BP26_BRUA1 / Q44642 26 kDa periplasmic immunogenic protein from Brucella abortus (strain S19) (see paper)
WP_002969580 SIMPL domain-containing protein from Brucella abortus
Aligns to 40:247 / 250 (83.2%), covers 100.0% of PF04402, 157.8 bits

SFV_2968 putative actin (NCBI) from Shigella flexneri 5 str. 8401
Aligns to 19:219 / 235 (85.5%), covers 100.0% of PF04402, 153.0 bits

YggE / b2922 uncharacterized protein YggE from Escherichia coli K-12 substr. MG1655 (see 11 papers)
yggE / RF|NP_417397 uncharacterized protein yggE from Escherichia coli K12 (see paper)
b2922 hypothetical protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
NP_417397 oxidative stress defense protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 30:230 / 246 (81.7%), covers 100.0% of PF04402, 152.8 bits

c3500 Hypothetical protein yggE (NCBI ptt file) from Escherichia coli CFT073
Aligns to 30:230 / 246 (81.7%), covers 100.0% of PF04402, 151.7 bits

Rv3623 PROBABLE CONSERVED LIPOPROTEIN LPQG (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 38:237 / 240 (83.3%), covers 100.0% of PF04402, 143.7 bits

VC0483 conserved hypothetical protein (NCBI ptt file) from Vibrio cholerae O1 biovar eltor str. N16961
Aligns to 35:234 / 238 (84.0%), covers 100.0% of PF04402, 134.0 bits

BA4304 conserved hypothetical protein (NCBI ptt file) from Bacillus anthracis str. Ames
Aligns to 23:220 / 223 (88.8%), covers 100.0% of PF04402, 131.7 bits

slr0431 unknown protein (NCBI ptt file) from Synechocystis sp. PCC 6803
Aligns to 48:248 / 250 (80.4%), covers 99.5% of PF04402, 125.6 bits

Hlac_2298 protein of unknown function DUF541 (RefSeq) from Halorubrum lacusprofundi ATCC 49239
Aligns to 44:246 / 251 (80.9%), covers 100.0% of PF04402, 118.3 bits

LA2656 hypothetical protein from Leptospira interrogans serovar Lai str. 56601
Aligns to 27:220 / 223 (87.0%), covers 100.0% of PF04402, 112.5 bits

FSU_2695 DUF541 domain-containing protein from Fibrobacter succinogenes subsp. succinogenes S85
Aligns to 48:258 / 261 (80.8%), covers 100.0% of PF04402, 103.6 bits

BPSL0972 putative exported protein (NCBI) from Burkholderia pseudomallei K96243
Aligns to 43:242 / 245 (81.6%), covers 98.5% of PF04402, 95.2 bits

PA4495 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 31:231 / 236 (85.2%), covers 97.5% of PF04402, 94.1 bits

IKBP1_MOUSE / Q9ESJ7 Interleukin-1 receptor-associated kinase 1-binding protein 1; IRAK1-binding protein 1; ActA-binding protein 70; PLK-interacting protein; Signaling molecule that associates with the mouse pelle-like kinase; SIMPL from Mus musculus (Mouse) (see 4 papers)
NP_075362 interleukin-1 receptor-associated kinase 1-binding protein 1 isoform 1 from Mus musculus
Aligns to 52:250 / 259 (76.8%), covers 86.5% of PF04402, 85.9 bits

NMA1059 putative periplasmic protein (NCBI ptt file) from Neisseria meningitidis Z2491
Aligns to 27:234 / 234 (88.9%), covers 98.5% of PF04402, 79.8 bits

PM1566 unknown (NCBI ptt file) from Pasteurella multocida subsp. multocida str. Pm70
Aligns to 31:232 / 237 (85.2%), covers 99.0% of PF04402, 60.7 bits

VV0509 conserved hypothetical protein (NCBI) from Vibrio vulnificus YJ016
Aligns to 41:234 / 238 (81.5%), covers 80.5% of PF04402, 59.4 bits

YP_002343505 periplasmic protein from Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Cj0034c putative periplasmic protein (NCBI ptt file) from Campylobacter jejuni subsp. jejuni NCTC 11168
Aligns to 37:227 / 233 (82.0%), covers 80.0% of PF04402, 53.7 bits

XP_011533750 interleukin-1 receptor-associated kinase 1-binding protein 1 isoform X3 from Homo sapiens
Aligns to 53:151 / 157 (63.1%), covers 32.0% of PF04402, 42.9 bits

BBK13 conserved hypothetical protein (NCBI ptt file) from Borrelia burgdorferi B31
Aligns to 45:225 / 238 (76.1%), covers 79.0% of PF04402, 34.5 bits

WS1329 PUTATIVE PERIPLASMIC PROTEIN (NCBI) from Wolinella succinogenes DSM 1740
Aligns to 49:244 / 246 (79.7%), covers 82.5% of PF04402, 32.2 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory