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Family Search for PF04402 (SIMPL)

PF04402.14 hits 46 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YP_002826772 outer membrane protein from Sinorhizobium fredii NGR234
Aligns to 53:257 / 261 (78.5%), covers 100.0% of PF04402, 166.6 bits

SMc01556 CONSERVED HYPOTHETICAL PROTEIN (NCBI ptt file) from Sinorhizobium meliloti 1021
Aligns to 53:258 / 262 (78.6%), covers 100.0% of PF04402, 165.9 bits

ZMO0286 hypothetical protein (RefSeq) from Zymomonas mobilis subsp. mobilis ZM4
Aligns to 51:254 / 257 (79.4%), covers 99.0% of PF04402, 160.8 bits

BH11510 Outer membrane protein (NCBI) from Bartonella henselae str. Houston-1
Aligns to 42:242 / 245 (82.0%), covers 100.0% of PF04402, 160.3 bits

BMEI0536 PERIPLASMIC IMMUNOGENIC PROTEIN (NCBI ptt file) from Brucella melitensis 16M
BR1475 immunoreactive 28 kDa outer membrane protein (NCBI) from Brucella suis 1330
BruAb1_1470 Omp28, immunoreactive 28 kDa outer membrane protein (NCBI) from Brucella abortus biovar 1 str. 9-941
Aligns to 40:247 / 250 (83.2%), covers 100.0% of PF04402, 159.2 bits

BP26_BRUA1 / Q44642 26 kDa periplasmic immunogenic protein from Brucella abortus (strain S19) (see paper)
BAB1_1494 immunoreactive 28 kDa outer membrane protein (NCBI) from Brucella melitensis biovar Abortus 2308
WP_002969580 SIMPL domain-containing protein from Brucella abortus
Aligns to 40:247 / 250 (83.2%), covers 100.0% of PF04402, 157.8 bits

ETAE_2952 hypothetical protein (RefSeq) from Edwardsiella tarda EIB202
Aligns to 32:235 / 239 (85.4%), covers 99.0% of PF04402, 154.5 bits

RLO149_03347 hypothetical protein (RefSeq) from Roseobacter litoralis Och 149
Aligns to 1:186 / 190 (97.9%), covers 93.0% of PF04402, 153.2 bits

SFV_2968 putative actin (NCBI) from Shigella flexneri 5 str. 8401
Aligns to 19:219 / 235 (85.5%), covers 100.0% of PF04402, 153.0 bits

YggE / b2922 uncharacterized protein YggE from Escherichia coli K-12 substr. MG1655 (see 11 papers)
yggE / RF|NP_417397 uncharacterized protein yggE from Escherichia coli K12 (see paper)
b2922 hypothetical protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
NP_417397 uncharacterized protein YggE from Escherichia coli str. K-12 substr. MG1655
Z4259 putative actin (NCBI ptt file) from Escherichia coli O157:H7 EDL933
Aligns to 30:230 / 246 (81.7%), covers 100.0% of PF04402, 152.8 bits

c3500 Hypothetical protein yggE (NCBI ptt file) from Escherichia coli CFT073
Aligns to 30:230 / 246 (81.7%), covers 100.0% of PF04402, 151.7 bits

Vpar_0473 protein of unknown function DUF541 (RefSeq) from Veillonella parvula DSM 2008
Aligns to 38:240 / 243 (83.5%), covers 100.0% of PF04402, 149.9 bits

MAP0440c LpqG (NCBI) from Mycobacterium avium subsp. paratuberculosis str. k10
Aligns to 45:246 / 249 (81.1%), covers 100.0% of PF04402, 149.2 bits

YPO0917 putative exported protein (NCBI ptt file) from Yersinia pestis CO92
Aligns to 34:237 / 259 (78.8%), covers 99.0% of PF04402, 148.9 bits

plu3611 No description from Photorhabdus luminescens subsp. laumondii TTO1
Aligns to 31:236 / 240 (85.8%), covers 98.5% of PF04402, 147.3 bits

Rv3623 PROBABLE CONSERVED LIPOPROTEIN LPQG (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 38:237 / 240 (83.3%), covers 100.0% of PF04402, 143.7 bits

M892_13325 oxidative stress defense protein from Vibrio campbellii ATCC BAA-1116
Aligns to 30:228 / 231 (86.1%), covers 100.0% of PF04402, 138.5 bits

TDE1584 lipoprotein from Treponema denticola ATCC 35405
Aligns to 35:246 / 249 (85.1%), covers 100.0% of PF04402, 137.3 bits

VC0483 conserved hypothetical protein (NCBI ptt file) from Vibrio cholerae O1 biovar eltor str. N16961
Aligns to 35:234 / 238 (84.0%), covers 100.0% of PF04402, 134.0 bits

BA4304 conserved hypothetical protein (NCBI ptt file) from Bacillus anthracis str. Ames
Aligns to 23:220 / 223 (88.8%), covers 100.0% of PF04402, 131.7 bits

slr0431 unknown protein (NCBI ptt file) from Synechocystis sp. PCC 6803
Aligns to 48:248 / 250 (80.4%), covers 99.5% of PF04402, 125.6 bits

Hlac_2298 protein of unknown function DUF541 (RefSeq) from Halorubrum lacusprofundi ATCC 49239
Aligns to 44:246 / 251 (80.9%), covers 100.0% of PF04402, 118.3 bits

SCO2021 hypothetical protein (NCBI) from Streptomyces coelicolor A3(2)
Aligns to 1:193 / 197 (98.0%), covers 96.5% of PF04402, 117.4 bits

LIC11334 conserved hypothetical protein (NCBI) from Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
LA2656 hypothetical protein from Leptospira interrogans serovar Lai str. 56601
Aligns to 27:220 / 223 (87.0%), covers 100.0% of PF04402, 112.5 bits

WP_016560806 DUF541 domain-containing protein from Leptospira kirschneri serovar Cynopteri str. 3522 CT
Aligns to 27:222 / 225 (87.1%), covers 100.0% of PF04402, 111.1 bits

FSU_2695 DUF541 domain-containing protein from Fibrobacter succinogenes subsp. succinogenes S85
Aligns to 48:258 / 261 (80.8%), covers 100.0% of PF04402, 103.6 bits

BCAL2669 hypothetical protein (RefSeq) from Burkholderia cenocepacia J2315
Aligns to 44:243 / 246 (81.3%), covers 98.5% of PF04402, 100.1 bits

BPSL0972 putative exported protein (NCBI) from Burkholderia pseudomallei K96243
Aligns to 43:242 / 245 (81.6%), covers 98.5% of PF04402, 95.2 bits

PA4495 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 31:231 / 236 (85.2%), covers 97.5% of PF04402, 94.1 bits

MSMEG_6215 hypothetical protein (NCBI) from Mycobacterium smegmatis str. MC2 155
Aligns to 23:235 / 241 (88.4%), covers 100.0% of PF04402, 93.0 bits

COO72_RS04240 DUF541 domain-containing protein from Bifidobacterium callitrichos
Aligns to 12:227 / 230 (93.9%), covers 97.0% of PF04402, 92.7 bits

A1S_2455 putative signal peptide (RefSeq) from Acinetobacter baumannii ATCC 17978
Aligns to 15:213 / 216 (92.1%), covers 98.5% of PF04402, 89.0 bits

ABZJ_02909 DUF541 domain-containing protein from Acinetobacter baumannii MDR-ZJ06
Aligns to 32:230 / 233 (85.4%), covers 98.5% of PF04402, 88.6 bits

IKBP1_MOUSE / Q9ESJ7 Interleukin-1 receptor-associated kinase 1-binding protein 1; IRAK1-binding protein 1; ActA-binding protein 70; PLK-interacting protein; Signaling molecule that associates with the mouse pelle-like kinase; SIMPL from Mus musculus (Mouse) (see 4 papers)
NP_075362 interleukin-1 receptor-associated kinase 1-binding protein 1 isoform 1 from Mus musculus
Aligns to 52:250 / 259 (76.8%), covers 86.5% of PF04402, 85.9 bits

NMA1059 putative periplasmic protein (NCBI ptt file) from Neisseria meningitidis Z2491
Aligns to 27:234 / 234 (88.9%), covers 98.5% of PF04402, 79.8 bits

SynWH7803_0803 SIMPL domain-containing protein from Synechococcus sp. WH 7803
Aligns to 39:239 / 242 (83.1%), covers 79.5% of PF04402, 71.9 bits

ECs2473 hypothetical lipoprotein (NCBI) from Escherichia coli O157:H7 str. Sakai
Aligns to 42:236 / 240 (81.2%), covers 100.0% of PF04402, 67.3 bits

PM1566 unknown (NCBI ptt file) from Pasteurella multocida subsp. multocida str. Pm70
Aligns to 31:232 / 237 (85.2%), covers 99.0% of PF04402, 60.7 bits

M892_08695 SIMPL domain-containing protein from Vibrio campbellii ATCC BAA-1116
Aligns to 41:235 / 239 (81.6%), covers 79.5% of PF04402, 60.6 bits

VV0509 conserved hypothetical protein (NCBI) from Vibrio vulnificus YJ016
Aligns to 41:234 / 238 (81.5%), covers 80.5% of PF04402, 59.4 bits

CJJ81176_0072 hypothetical protein (NCBI) from Campylobacter jejuni subsp. jejuni 81-176
Aligns to 37:227 / 233 (82.0%), covers 80.0% of PF04402, 55.5 bits

CJE0033 hypothetical protein (NCBI) from Campylobacter jejuni RM1221
Cj0034c putative periplasmic protein (NCBI ptt file) from Campylobacter jejuni subsp. jejuni NCTC 11168
YP_002343505 periplasmic protein from Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Aligns to 37:227 / 233 (82.0%), covers 80.0% of PF04402, 53.7 bits

XP_011533750 interleukin-1 receptor-associated kinase 1-binding protein 1 isoform X3 from Homo sapiens
Aligns to 53:151 / 157 (63.1%), covers 32.0% of PF04402, 42.9 bits

BBK13 conserved hypothetical protein (NCBI ptt file) from Borrelia burgdorferi B31
Aligns to 45:225 / 238 (76.1%), covers 79.0% of PF04402, 34.5 bits

WS1329 PUTATIVE PERIPLASMIC PROTEIN (NCBI) from Wolinella succinogenes DSM 1740
Aligns to 49:244 / 246 (79.7%), covers 82.5% of PF04402, 32.2 bits

VV1_0634 hypothetical protein (NCBI) from Vibrio vulnificus CMCP6
Aligns to 38:151 / 170 (67.1%), covers 51.5% of PF04402, 30.4 bits

Or search for genetic data about PF04402 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory