PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF04502 (DUF572)

PF04502.13 hits 12 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YJU2_DANRE / A8WHR3 YJU2 splicing factor homolog from Danio rerio (Zebrafish) (Brachydanio rerio) (see paper)
NP_001104303 coiled-coil domain-containing protein 94 from Danio rerio
Aligns to 9:341 / 345 (96.5%), covers 100.0% of PF04502, 377.1 bits

YJU2_HUMAN / Q9BW85 YJU2 splicing factor homolog; Coiled-coil domain-containing protein 94 from Homo sapiens (Human) (see 2 papers)
Aligns to 9:318 / 323 (96.0%), covers 100.0% of PF04502, 372.5 bits

CG8435 uncharacterized protein from Drosophila melanogaster
Aligns to 9:330 / 333 (96.7%), covers 100.0% of PF04502, 358.4 bits

CC130_HUMAN / P13994 Coiled-coil domain-containing protein 130; 9 kDa protein from Homo sapiens (Human) (see paper)
Aligns to 9:395 / 396 (97.7%), covers 100.0% of PF04502, 322.2 bits

AT1G17130 cell cycle control protein-related (RefSeq) from Arabidopsis thaliana
Aligns to 9:329 / 331 (97.0%), covers 89.8% of PF04502, 321.4 bits

CG15084 uncharacterized protein from Drosophila melanogaster
Aligns to 9:314 / 316 (96.8%), covers 84.9% of PF04502, 262.7 bits

AT1G25682 cell cycle control protein-related (RefSeq) from Arabidopsis thaliana
Aligns to 12:309 / 310 (96.1%), covers 79.2% of PF04502, 222.1 bits

CWF16_SCHPO / Q9P7C5 Pre-mRNA-splicing factor cwf16; Complexed with cdc5 protein 16 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
cwf16 / RF|XP_001713052.1 splicing factor (predicted) from Schizosaccharomyces pombe (see 2 papers)
Aligns to 9:269 / 270 (96.7%), covers 65.4% of PF04502, 220.0 bits

AT3G43250 cell cycle control protein-related (RefSeq) from Arabidopsis thaliana
Aligns to 9:247 / 249 (96.0%), covers 70.2% of PF04502, 219.3 bits

AT2G32050 cell cycle control protein-related (RefSeq) from Arabidopsis thaliana
Aligns to 9:250 / 254 (95.3%), covers 70.5% of PF04502, 202.5 bits

CWC16_SCHPO / O60141 Protein saf4 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
Aligns to 8:292 / 299 (95.3%), covers 67.2% of PF04502, 181.1 bits

CWC16_YEAST / P28320 Protein CWC16 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
NP_012828 mRNA splicing protein YJU2 from Saccharomyces cerevisiae S288C
YKL095W Essential protein required for pre-mRNA splicing; associates transiently with the spliceosomal NTC ('nineteen complex') and acts after Prp2p to promote the first catalytic reaction of splicing (RefSeq) from Saccharomyces cerevisiae
Aligns to 9:275 / 278 (96.0%), covers 66.3% of PF04502, 161.9 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory