PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF04504 (DUF573)

PF04504.14 hits 18 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

AT3G04930 transcription regulator (RefSeq) from Arabidopsis thaliana
Aligns to 138:234 / 456 (21.3%), covers 100.0% of PF04504, 118.3 bits

NP_001318667 DNA-binding storekeeper protein-related transcriptional regulator from Arabidopsis thaliana
AT5G28040 transcription regulator (RefSeq) from Arabidopsis thaliana
Aligns to 125:221 / 427 (22.7%), covers 100.0% of PF04504, 117.5 bits

LOC105059742 probable transcription factor At3g04930 from Elaeis guineensis
Aligns to 130:227 / 406 (24.1%), covers 100.0% of PF04504, 115.4 bits

AT1G61730 DNA-binding storekeeper protein-related (RefSeq) from Arabidopsis thaliana
Aligns to 155:245 / 376 (24.2%), covers 100.0% of PF04504, 111.6 bits

AT4G00390 transcription regulator (RefSeq) from Arabidopsis thaliana
O23063 Probable transcription factor At4g00390 from Arabidopsis thaliana
Aligns to 157:247 / 364 (25.0%), covers 100.0% of PF04504, 109.4 bits

AT1G11510 DNA-binding storekeeper protein-related (RefSeq) from Arabidopsis thaliana
Aligns to 138:229 / 352 (26.1%), covers 100.0% of PF04504, 108.3 bits

STKLS_ARATH / Q9SB42 GLABROUS1 enhancer-binding protein-like; Mediator-associated protein 1; Protein GeBPL; Storekeeper-like protein At4g25210; Transcription factor At4g25210 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
AT4G25210 transcription regulator (RefSeq) from Arabidopsis thaliana
NP_194251 DNA-binding storekeeper protein-related transcriptional regulator from Arabidopsis thaliana
Aligns to 141:238 / 368 (26.6%), covers 100.0% of PF04504, 100.8 bits

STKLH_ARATH / Q8VYD2 GLABROUS1 enhancer-binding protein-like 1; Protein GPL1; Storekeeper-like protein At2g25650 from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
NP_565602 DNA-binding storekeeper protein-related transcriptional regulator from Arabidopsis thaliana
AT2G25650 DNA-binding storekeeper protein-related (RefSeq) from Arabidopsis thaliana
Aligns to 65:159 / 386 (24.6%), covers 98.9% of PF04504, 99.5 bits

STKLO_ARATH / Q9ASZ1 GLABROUS1 enhancer-binding protein; Probable transcription factor At4g00270; Protein GeBP; Protein STOREKEEPER RELATED 1; Storekeeper-like protein At4g00270 from Arabidopsis thaliana (Mouse-ear cress) (see 5 papers)
AT4G00270 DNA-binding storekeeper protein-related (RefSeq) from Arabidopsis thaliana
Aligns to 64:158 / 302 (31.5%), covers 98.9% of PF04504, 95.7 bits

STKLT_ARATH / P0DKL0 GLABROUS1 enhancer-binding protein-like 2; Protein GPL2; Storekeeper-like protein At5g14280 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
Aligns to 61:155 / 301 (31.6%), covers 97.9% of PF04504, 93.1 bits

STK_SOLTU / Q94IK2 STOREKEEPER protein from Solanum tuberosum (Potato) (see paper)
Aligns to 156:247 / 399 (23.1%), covers 97.9% of PF04504, 92.5 bits

AT5G14280 DNA-binding storekeeper protein-related (RefSeq) from Arabidopsis thaliana
Aligns to 61:155 / 572 (16.6%), covers 97.9% of PF04504, 91.5 bits

AT1G44810 transcription regulator (RefSeq) from Arabidopsis thaliana
NP_564491 DNA-binding storekeeper protein-related transcriptional regulator from Arabidopsis thaliana
Aligns to 122:210 / 296 (30.1%), covers 100.0% of PF04504, 87.7 bits

STKLN_ARATH / O23077 Transcription factor STKL2; Protein Storekeeper-like 2 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
AT4G00250 DNA-binding storekeeper protein-related (RefSeq) from Arabidopsis thaliana
NP_567161 DNA-binding storekeeper protein-related transcriptional regulator from Arabidopsis thaliana
Aligns to 115:203 / 319 (27.9%), covers 98.9% of PF04504, 87.1 bits

STKLI_ARATH / Q9SJM4 GLABROUS1 enhancer-binding protein-like 3; Protein GPL3; Storekeeper-like protein At2g36340 from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
AT2G36340 DNA-binding storekeeper protein-related (RefSeq) from Arabidopsis thaliana
Aligns to 59:153 / 414 (22.9%), covers 97.9% of PF04504, 83.7 bits

STKLM_ARATH / Q8LG05 Transcription factor STKL1; Protein Storekeeper-like 1 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
NP_567159 DNA-binding storekeeper protein-related transcriptional regulator from Arabidopsis thaliana
Aligns to 140:228 / 345 (25.8%), covers 98.9% of PF04504, 79.7 bits

AT4G00232 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 43:135 / 154 (60.4%), covers 96.8% of PF04504, 68.0 bits

AT4G00130 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 22:90 / 194 (35.6%), covers 60.0% of PF04504, 41.2 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory