PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF05142 (DUF702)

PF05142.12 hits 11 sequences in PaperBLAST's database above the trusted cutoff. Showing hits to curated sequences only. Or see all hits or try another family.

SRS1_ARATH / Q9SD40 Protein SHI RELATED SEQUENCE 1; Protein STYLISH 1 from Arabidopsis thaliana (Mouse-ear cress) (see 7 papers)
Aligns to 140:287 / 370 (40.0%), covers 98.0% of PF05142, 216.7 bits

SHI_ARATH / Q9XGX0 Protein SHORT INTERNODES from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
Aligns to 116:263 / 331 (44.7%), covers 98.7% of PF05142, 216.1 bits

SRS7_ARATH / Q9FXH7 Protein SHI RELATED SEQUENCE 7 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
Aligns to 115:272 / 345 (45.8%), covers 98.7% of PF05142, 215.0 bits

SRS5_ARATH / Q9LQZ5 Protein SHI RELATED SEQUENCE 5 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
Aligns to 121:285 / 346 (47.7%), covers 98.7% of PF05142, 211.3 bits

SRS2_ARATH / O65517 Protein SHI RELATED SEQUENCE 2; Protein STYLISH 2 from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
Aligns to 90:247 / 322 (49.1%), covers 98.7% of PF05142, 208.0 bits

LRP1_ARATH / Q94CK9 Protein LATERAL ROOT PRIMORDIUM 1 from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
Aligns to 108:272 / 320 (51.6%), covers 98.7% of PF05142, 198.5 bits

SRS4_ARATH / Q9SI19 Protein SHI RELATED SEQUENCE 4 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
Aligns to 68:207 / 222 (63.1%), covers 98.7% of PF05142, 190.7 bits

SRS3_ARATH / Q9SJT8 Protein SHI RELATED SEQUENCE 3 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
2 alignments in 5:126 / 174 (70.1%), covering up to 38.0% of PF05142, 168.7 bits

Or search for genetic data about PF05142 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory