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Family Search for PF05255 (UPF0220)

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Running HMMer for PF05255

PF05255 hits 11 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

VPS68_YEAST / Q12016 Vacuolar protein sorting-associated protein 68 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
TC 9.B.199.1.7 / Q12016 Vacuolar protein sorting-associated protein 68, Vps68, of 184 aas and 4 TMSs from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
YOL129W Vacuolar membrane protein of unknown function involved in vacuolar protein sorting; also detected in the mitochondria from Saccharomyces cerevisiae
NP_014512 Vps68p from Saccharomyces cerevisiae S288C
Aligns to 5:178 / 184 (94.6%), covers 98.2% of PF05255, 234.7 bits

SPBC8D2.02c vacuolar sorting protein Vps68 from Schizosaccharomyces pombe
Aligns to 4:164 / 170 (94.7%), covers 98.2% of PF05255, 193.9 bits

XP_020926594 transmembrane protein 50B from Sus scrofa
P56557 Transmembrane protein 50B from Homo sapiens
Aligns to 4:157 / 158 (97.5%), covers 98.8% of PF05255, 184.1 bits

TM50B_MOUSE / Q9D1X9 Transmembrane protein 50B from Mus musculus (Mouse) (see paper)
XP_017453514 transmembrane protein 50B isoform X1 from Rattus norvegicus
NP_084294 transmembrane protein 50B isoform 1 from Mus musculus
Aligns to 4:157 / 158 (97.5%), covers 98.8% of PF05255, 182.6 bits

CNAG_06792 hypothetical protein from Cryptococcus neoformans var. grubii H99
Aligns to 9:181 / 187 (92.5%), covers 98.2% of PF05255, 170.9 bits

Q9CXL1 Transmembrane protein 50A from Mus musculus
Aligns to 5:156 / 157 (96.8%), covers 96.4% of PF05255, 168.9 bits

O95807 Transmembrane protein 50A from Homo sapiens
Aligns to 5:156 / 157 (96.8%), covers 97.0% of PF05255, 168.1 bits

CG15012 uncharacterized protein from Drosophila melanogaster
Aligns to 4:150 / 152 (96.7%), covers 92.8% of PF05255, 125.3 bits

XP_044389037 transmembrane protein 50 homolog from Triticum aestivum
Aligns to 8:141 / 141 (95.0%), covers 83.1% of PF05255, 97.2 bits

AT1G36980 hypothetical protein from Arabidopsis thaliana
Aligns to 4:135 / 135 (97.8%), covers 80.1% of PF05255, 86.4 bits

C6T022 Transmembrane protein 50A from Glycine max
Aligns to 5:135 / 135 (97.0%), covers 80.7% of PF05255, 82.0 bits

Or search for genetic data about PF05255 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory