PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF05305 (DUF732)

PF05305.14 hits 24 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

MAP2786c hypothetical protein (NCBI) from Mycobacterium avium subsp. paratuberculosis str. k10
Aligns to 5:99 / 114 (83.3%), covers 97.9% of PF05305, 103.6 bits

MMAR_2686 hypothetical protein (RefSeq) from Mycobacterium marinum M
Aligns to 5:104 / 106 (94.3%), covers 97.9% of PF05305, 98.1 bits

MAP2785c hypothetical protein (NCBI) from Mycobacterium avium subsp. paratuberculosis str. k10
Aligns to 52:147 / 161 (59.6%), covers 96.8% of PF05305, 94.0 bits

MAV_2912 hypothetical protein (NCBI) from Mycobacterium avium 104
Aligns to 5:99 / 111 (85.6%), covers 96.8% of PF05305, 92.9 bits

Rv1804c hypothetical protein (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 5:101 / 108 (89.8%), covers 94.7% of PF05305, 89.7 bits

MAP1154 hypothetical protein (NCBI) from Mycobacterium avium subsp. paratuberculosis str. k10
Aligns to 5:108 / 117 (88.9%), covers 97.9% of PF05305, 88.2 bits

MSMEG_3493 putative secreted protein (NCBI) from Mycobacterium smegmatis str. MC2 155
Aligns to 7:101 / 113 (84.1%), covers 97.9% of PF05305, 87.1 bits

Rv1810 hypothetical protein (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 18:114 / 118 (82.2%), covers 97.9% of PF05305, 85.8 bits

MAV_1419 hypothetical protein (NCBI) from Mycobacterium avium 104
Aligns to 11:106 / 110 (87.3%), covers 95.8% of PF05305, 85.5 bits

NP_217871 hypothetical protein from Mycobacterium tuberculosis H37Rv
Rv3354 hypothetical protein (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 15:110 / 129 (74.4%), covers 97.9% of PF05305, 84.8 bits

Rv3333c HYPOTHETICAL PROLINE RICH PROTEIN (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 15:121 / 281 (38.1%), covers 97.9% of PF05305, 83.7 bits

Y559_MYCTU / P9WKL3 Uncharacterized protein Rv0559c from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
Rv0559c POSSIBLE CONSERVED SECRETED PROTEIN (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 8:104 / 112 (86.6%), covers 97.9% of PF05305, 83.1 bits

Rv1291c CONSERVED HYPOTHETICAL SECRETED PROTEIN (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 16:109 / 111 (84.7%), covers 97.9% of PF05305, 83.0 bits

MAV_4583 hypothetical protein (NCBI) from Mycobacterium avium 104
Aligns to 6:127 / 134 (91.0%), covers 98.9% of PF05305, 82.5 bits

ML2274 putative secreted protein (NCBI ptt file) from Mycobacterium leprae TN
Aligns to 8:104 / 112 (86.6%), covers 96.8% of PF05305, 82.1 bits

Rv1271c CONSERVED HYPOTHETICAL SECRETED PROTEIN (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 17:110 / 113 (83.2%), covers 96.8% of PF05305, 81.8 bits

LPRJ_MYCTU / O33192 Putative lipoprotein LprJ from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
Rv1690 PROBABLE LIPOPROTEIN LPRJ (NCBI) from Mycobacterium tuberculosis H37Rv
MT1729 hypothetical protein (NCBI) from Mycobacterium tuberculosis CDC1551
Aligns to 24:118 / 127 (74.8%), covers 95.8% of PF05305, 72.4 bits

Mb1716 PROBABLE LIPOPROTEIN LPRJ (NCBI) from Mycobacterium bovis AF2122/97
Aligns to 36:130 / 139 (68.3%), covers 95.8% of PF05305, 72.1 bits

MAP1703c hypothetical protein (NCBI) from Mycobacterium avium subsp. paratuberculosis str. k10
Aligns to 12:109 / 117 (83.8%), covers 93.7% of PF05305, 61.5 bits

MMAR_2891 hypothetical protein (RefSeq) from Mycobacterium marinum M
Aligns to 13:108 / 122 (78.7%), covers 98.9% of PF05305, 60.7 bits

MMAR_2929 hypothetical protein (RefSeq) from Mycobacterium marinum M
Aligns to 11:107 / 107 (90.7%), covers 93.7% of PF05305, 60.6 bits

Rv1974 PROBABLE CONSERVED MEMBRANE PROTEIN (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 12:112 / 125 (80.8%), covers 94.7% of PF05305, 60.1 bits

Rv3067 hypothetical protein (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 29:130 / 136 (75.0%), covers 89.5% of PF05305, 58.3 bits

MAVA5_06970 DUF732 domain-containing protein from Mycobacterium avium subsp. hominissuis A5
MAV_1445 hypothetical protein (NCBI) from Mycobacterium avium 104
Aligns to 4:95 / 95 (96.8%), covers 93.7% of PF05305, 56.2 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory