PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF05600 (DUF773)

PF05600.12 hits 10 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

F1RWH6 CDK5 regulatory subunit-associated protein 3 isoform b from Sus scrofa
Aligns to 4:502 / 505 (98.8%), covers 99.8% of PF05600, 652.4 bits

CK5P3_MOUSE / Q99LM2 CDK5 regulatory subunit-associated protein 3 from Mus musculus (Mouse) (see 2 papers)
Aligns to 4:500 / 503 (98.8%), covers 99.8% of PF05600, 640.0 bits

NP_001002105 CDK5 regulatory subunit-associated protein 3 from Danio rerio
Aligns to 4:504 / 507 (98.8%), covers 99.8% of PF05600, 638.7 bits

Q3U506 Uncharacterized protein from Mus musculus
Aligns to 4:500 / 503 (98.8%), covers 99.8% of PF05600, 638.4 bits

NP_077814 CDK5 regulatory subunit-associated protein 3 from Rattus norvegicus
Q642E3 CDK5 regulatory subunit associated protein 3, isoform CRA_b from Rattus norvegicus
Aligns to 4:501 / 504 (98.8%), covers 99.8% of PF05600, 636.1 bits

CK5P3_HUMAN / Q96JB5 CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53; LXXLL/leucine-zipper-containing ARF-binding protein; Protein HSF-27 from Homo sapiens (Human) (see 15 papers)
Aligns to 4:503 / 506 (98.8%), covers 99.8% of PF05600, 635.2 bits

XP_011523599 CDK5 regulatory subunit-associated protein 3 isoform X1 from Homo sapiens
Aligns to 29:528 / 531 (94.2%), covers 99.8% of PF05600, 634.9 bits

CK5P3_RAT / Q9JLH7 CDK5 regulatory subunit-associated protein 3; CDK5 activator-binding protein C53 from Rattus norvegicus (Rat) (see 3 papers)
Aligns to 4:501 / 504 (98.8%), covers 99.8% of PF05600, 630.5 bits

NP_001295112 CDK5 regulatory subunit-associated protein 3 isoform 2 from Mus musculus
Aligns to 1:389 / 392 (99.2%), covers 78.3% of PF05600, 433.3 bits

Smp_127510 putative myosin XV from Schistosoma mansoni
Aligns to 2040:2325 / 2339 (12.2%), covers 43.3% of PF05600, 90.9 bits

Or search for genetic data about PF05600 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory