PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF05656 (DUF805)

PF05656.14 hits 17 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YhaH / b3103 putative inner membrane protein from Escherichia coli K-12 substr. MG1655 (see paper)
b3103 predicted inner membrane protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
Aligns to 11:117 / 121 (88.4%), covers 100.0% of PF05656, 120.6 bits

YhaI / b3104 putative inner membrane protein from Escherichia coli K-12 substr. MG1655 (see paper)
b3104 predicted inner membrane protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
Aligns to 11:113 / 118 (87.3%), covers 100.0% of PF05656, 113.9 bits

plu2346 No description from Photorhabdus luminescens subsp. laumondii TTO1
Aligns to 11:118 / 122 (88.5%), covers 99.0% of PF05656, 104.8 bits

BC2001 Integral membrane protein (NCBI ptt file) from Bacillus cereus ATCC 14579
Aligns to 11:112 / 120 (85.0%), covers 100.0% of PF05656, 100.7 bits

lmo0672 similar to unknown protein (NCBI ptt file) from Listeria monocytogenes EGD-e
Aligns to 14:135 / 142 (85.9%), covers 98.1% of PF05656, 93.6 bits

YiiR / b3921 DUF805 domain-containing protein YiiR from Escherichia coli K-12 substr. MG1655 (see paper)
Aligns to 7:133 / 146 (87.0%), covers 98.1% of PF05656, 77.3 bits

ACICU_03432 hypothetical protein (RefSeq) from Acinetobacter baumannii ACICU
Aligns to 4:118 / 171 (67.3%), covers 98.1% of PF05656, 75.6 bits

lp_1702 integral membrane protein (NCBI ptt file) from Lactobacillus plantarum WCFS1
Aligns to 12:121 / 121 (90.9%), covers 91.4% of PF05656, 75.4 bits

M3Q_3669 DUF805 domain-containing protein from Acinetobacter baumannii TYTH-1
Aligns to 15:129 / 182 (63.2%), covers 98.1% of PF05656, 75.3 bits

PA0659 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 174:277 / 358 (29.1%), covers 99.0% of PF05656, 74.8 bits

SAOUHSC_02620 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus NCTC 8325
Aligns to 20:180 / 215 (74.9%), covers 100.0% of PF05656, 67.4 bits

SA2133 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus N315
Aligns to 20:180 / 206 (78.2%), covers 100.0% of PF05656, 67.3 bits

PMT1567 conserved hypothetical protein (NCBI) from Prochlorococcus marinus str. MIT 9313
Aligns to 14:107 / 108 (87.0%), covers 91.4% of PF05656, 62.8 bits

EF1089 conserved hypothetical protein (NCBI ptt file) from Enterococcus faecalis V583
Aligns to 12:124 / 131 (86.3%), covers 88.6% of PF05656, 62.4 bits

SSA_0718 Conserved uncharacterized protein (NCBI) from Streptococcus sanguinis SK36
Aligns to 12:165 / 364 (42.3%), covers 98.1% of PF05656, 61.0 bits

A1S_3236 hypothetical protein (RefSeq) from Acinetobacter baumannii ATCC 17978
Aligns to 2:84 / 137 (60.6%), covers 59.0% of PF05656, 58.6 bits

llmg_1683 hypothetical protein (NCBI) from Lactococcus lactis subsp. cremoris MG1363
Aligns to 12:166 / 173 (89.6%), covers 74.3% of PF05656, 43.6 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory