PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF05853 (BKACE)

PF05853.12 hits 22 sequences in PaperBLAST's database above the trusted cutoff. Showing hits to curated sequences only. Or see all hits or try another family.

PS417_07250 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae WCS417
Aligns to 6:302 / 310 (95.8%), covers 100.0% of PF05853, 357.4 bits

H281DRAFT_00641 2-deoxy-3-keto-D-ribonate cleavage enzyme from Paraburkholderia bryophila 376MFSha3.1
Aligns to 7:304 / 312 (95.5%), covers 100.0% of PF05853, 355.0 bits

KCE_FUSNN / Q8RHX2 3-keto-5-aminohexanoate cleavage enzyme; EC 2.3.1.247 from Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) (see 2 papers)
Q8RHX2 3-keto-5-aminohexanoate cleavage enzyme (EC 2.3.1.247) from Fusobacterium nucleatum (see 2 papers)
Aligns to 4:270 / 272 (98.2%), covers 100.0% of PF05853, 352.6 bits

KCE_CLOAI / B0VHH0 3-keto-5-aminohexanoate cleavage enzyme; EC 2.3.1.247 from Cloacimonas acidaminovorans (strain Evry) (see paper)
B0VHH0 3-keto-5-aminohexanoate cleavage enzyme (EC 2.3.1.247) from Candidatus Cloacimonas acidaminovorans (see paper)
Aligns to 3:274 / 276 (98.6%), covers 100.0% of PF05853, 333.2 bits

Pf6N2E2_4692 dehydrocarnitine cleavage enzyme (EC 2.3.1.-) from Pseudomonas fluorescens FW300-N2E2
Aligns to 4:291 / 295 (97.6%), covers 99.6% of PF05853, 329.4 bits

Q9HTH7 carnitine 3-dehydrogenase (EC 1.1.1.108) from Pseudomonas aeruginosa (see paper)
Aligns to 4:291 / 294 (98.0%), covers 99.6% of PF05853, 324.4 bits

Or search for genetic data about PF05853 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory