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Family Search for PF05957 (DUF883)

PF05957.13 hits 25 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

PA3040 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
PA14_24770 hypothetical protein (NCBI) from Pseudomonas aeruginosa UCBPP-PA14
Aligns to 12:109 / 109 (89.9%), covers 100.0% of PF05957, 120.5 bits

RSc0753 PROBABLE TRANSMEMBRANE PROTEIN (NCBI ptt file) from Ralstonia solanacearum GMI1000
Aligns to 15:108 / 108 (87.0%), covers 100.0% of PF05957, 116.9 bits

PP_2105 conserved hypothetical protein (NCBI ptt file) from Pseudomonas putida KT2440
Aligns to 11:104 / 104 (90.4%), covers 97.9% of PF05957, 113.0 bits

YPTB3485 putative membrane associated protein (NCBI) from Yersinia pseudotuberculosis IP 32953
Aligns to 8:101 / 101 (93.1%), covers 98.9% of PF05957, 105.4 bits

PMI3699 hypothetical protein (RefSeq) from Proteus mirabilis HI4320
Aligns to 8:101 / 101 (93.1%), covers 100.0% of PF05957, 103.6 bits

BP1057 putative membrane protein (NCBI) from Bordetella pertussis Tohama I
Aligns to 12:105 / 105 (89.5%), covers 98.9% of PF05957, 103.0 bits

YqjD / b3098 ribosome- and membrane-associated DUF883 domain-containing protein YqjD from Escherichia coli K-12 substr. MG1655 (see 5 papers)
YQJD_ECOLI / P64581 Uncharacterized protein YqjD from Escherichia coli (strain K12) (see 2 papers)
c3856 Hypothetical protein yqjD (NCBI ptt file) from Escherichia coli CFT073
b3098 hypothetical protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
Aligns to 8:101 / 101 (93.1%), covers 98.9% of PF05957, 102.5 bits

PA2754 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 16:109 / 109 (86.2%), covers 98.9% of PF05957, 102.1 bits

YfbD / b2266 tail anchored inner membrane protein from Escherichia coli K-12 substr. MG1655 (see 7 papers)
ELAB_ECOLI / P0AEH5 Protein ElaB from Escherichia coli (strain K12) (see paper)
elaB / RF|NP_416769 protein elaB from Escherichia coli K12 (see paper)
b2266 hypothetical protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
NP_416769 tail anchored inner membrane protein from Escherichia coli str. K-12 substr. MG1655
c2810 ElaB protein (NCBI ptt file) from Escherichia coli CFT073
Aligns to 8:101 / 101 (93.1%), covers 97.9% of PF05957, 99.5 bits

STM2311 putative inner membrane protein (NCBI ptt file) from Salmonella typhimurium LT2
Aligns to 10:103 / 103 (91.3%), covers 98.9% of PF05957, 98.2 bits

SF2345 orf, conserved hypothetical protein (NCBI ptt file) from Shigella flexneri 2a str. 301
Aligns to 8:101 / 101 (93.1%), covers 97.9% of PF05957, 97.4 bits

plu3994 No description from Photorhabdus luminescens subsp. laumondii TTO1
Aligns to 8:101 / 101 (93.1%), covers 98.9% of PF05957, 96.7 bits

PPUBIRD1_0113 DUF883 domain-containing protein from Pseudomonas putida BIRD-1
Aligns to 12:106 / 107 (88.8%), covers 98.9% of PF05957, 89.7 bits

PA1323 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 16:109 / 110 (85.5%), covers 96.8% of PF05957, 88.0 bits

YgaM / b2672 DUF883 domain-containing protein YgaM from Escherichia coli K-12 substr. MG1655 (see 8 papers)
YGAM_ECOLI / P0ADQ7 Uncharacterized protein YgaM from Escherichia coli (strain K12) (see paper)
Aligns to 15:107 / 109 (85.3%), covers 98.9% of PF05957, 87.7 bits

b2672 orf, hypothetical protein (VIMSS) from Escherichia coli str. K-12 substr. MG1655
Aligns to 19:111 / 113 (82.3%), covers 98.9% of PF05957, 87.6 bits

PM0612 unknown (NCBI ptt file) from Pasteurella multocida subsp. multocida str. Pm70
Aligns to 10:103 / 103 (91.3%), covers 100.0% of PF05957, 87.5 bits

Bamb_5535 protein of unknown function DUF883, ElaB (NCBI) from Burkholderia cepacia AMMD
Aligns to 38:129 / 129 (71.3%), covers 98.9% of PF05957, 82.1 bits

mll3692 hypothetical protein (NCBI) from Mesorhizobium loti MAFF303099
Aligns to 16:108 / 108 (86.1%), covers 97.9% of PF05957, 73.4 bits

BQ11720 hypotethical (NCBI) from Bartonella quintana str. Toulouse
Aligns to 16:108 / 108 (86.1%), covers 97.9% of PF05957, 53.4 bits

BAB1_1675 DNA gyrase, subunit B (NCBI) from Brucella melitensis biovar Abortus 2308
BMEI0368 Hypothetical Protein (NCBI ptt file) from Brucella melitensis 16M
Aligns to 25:117 / 117 (79.5%), covers 98.9% of PF05957, 51.3 bits

BS1330_I1655 DUF883 family protein from Brucella suis 1330
Aligns to 25:117 / 117 (79.5%), covers 98.9% of PF05957, 50.5 bits

LB_340a hypothetical protein (RefSeq) from Leptospira interrogans serovar lai str. 56601
LIC20301 hypothetical protein (NCBI) from Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
Aligns to 1:92 / 92 (100.0%), covers 88.3% of PF05957, 50.1 bits

RL3701 putative transmembrane protein (NCBI) from Rhizobium leguminosarum bv. viciae 3841
Aligns to 22:114 / 114 (81.6%), covers 96.8% of PF05957, 46.2 bits

SMc01509 HYPOTHETICAL TRANSMEMBRANE PROTEIN (NCBI ptt file) from Sinorhizobium meliloti 1021
Aligns to 22:120 / 120 (82.5%), covers 97.9% of PF05957, 44.7 bits

Or search for genetic data about PF05957 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory