PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF05974 (DUF892)

PF05974.12 hits 19 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

SMc00371 CONSERVED HYPOTHETICAL PROTEIN (NCBI ptt file) from Sinorhizobium meliloti 1021
Aligns to 6:163 / 163 (96.9%), covers 100.0% of PF05974, 210.7 bits

XC_3753 hypothetical protein (NCBI) from Xanthomonas campestris pv. campestris str. 8004
Aligns to 5:162 / 168 (94.0%), covers 99.4% of PF05974, 204.7 bits

Atu5278 hypothetical protein (RefSeq) from Agrobacterium tumefaciens str. C58 (Cereon)
Aligns to 5:162 / 166 (95.2%), covers 98.1% of PF05974, 200.5 bits

t1641 conserved hypothetical protein (NCBI ptt file) from Salmonella enterica subsp. enterica serovar Typhi Ty2
Aligns to 5:163 / 167 (95.2%), covers 99.4% of PF05974, 195.2 bits

YciF / b1258 DUF892 domain-containing protein YciF from Escherichia coli K-12 substr. MG1655 (see 9 papers)
YCIF_ECOLI / P21362 Protein YciF from Escherichia coli (strain K12) (see paper)
b1258 hypothetical protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
NP_415774 putative rubrerythrin/ferritin-like metal-binding protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 5:163 / 166 (95.8%), covers 100.0% of PF05974, 184.7 bits

bll3758 bll3758 (NCBI ptt file) from Bradyrhizobium japonicum USDA 110
Aligns to 256:415 / 431 (37.1%), covers 96.9% of PF05974, 177.9 bits

PA2184 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 3:158 / 169 (92.3%), covers 98.1% of PF05974, 171.0 bits

XCV2099 hypothetical protein (NCBI) from Xanthomonas campestris pv. vesicatoria str. 85-10
XAC2155 conserved hypothetical protein (NCBI ptt file) from Xanthomonas axonopodis pv. citri str. 306
Aligns to 3:158 / 169 (92.3%), covers 98.1% of PF05974, 168.1 bits

SMb20091 CONSERVED HYPOTHETICAL PROTEIN (NCBI ptt file) from Sinorhizobium meliloti 1021
Aligns to 3:158 / 168 (92.9%), covers 99.4% of PF05974, 166.8 bits

ECs1653 hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 str. Sakai
Aligns to 2:157 / 168 (92.9%), covers 96.9% of PF05974, 165.9 bits

STM1730 putative cytoplasmic protein (NCBI ptt file) from Salmonella typhimurium LT2
Aligns to 2:157 / 168 (92.9%), covers 98.1% of PF05974, 165.1 bits

YciE / b1257 DUF892 domain-containing protein YciE from Escherichia coli K-12 substr. MG1655 (see 5 papers)
yciE / GB|AAC74339.1 protein yciE from Escherichia coli K12 (see paper)
NP_415773 putative rubrerythrin/ferritin-like metal-binding protein from Escherichia coli str. K-12 substr. MG1655
b1257 hypothetical protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
Aligns to 2:157 / 168 (92.9%), covers 96.9% of PF05974, 163.9 bits

XCC2020 conserved hypothetical protein (NCBI ptt file) from Xanthomonas campestris pv. campestris str. ATCC 33913
Aligns to 3:158 / 169 (92.3%), covers 98.1% of PF05974, 162.2 bits

XC_2164 hypothetical protein (NCBI) from Xanthomonas campestris pv. campestris str. 8004
Aligns to 3:158 / 169 (92.3%), covers 98.1% of PF05974, 160.8 bits

all0615 hypothetical protein (NCBI ptt file) from Nostoc sp. PCC 7120
Aligns to 15:173 / 183 (86.9%), covers 98.1% of PF05974, 153.8 bits

Deide_13500 hypothetical protein (RefSeq) from Deinococcus deserti VCD115
Aligns to 7:164 / 165 (95.8%), covers 96.9% of PF05974, 151.9 bits

XCC3681 conserved hypothetical protein (NCBI ptt file) from Xanthomonas campestris pv. campestris str. ATCC 33913
Aligns to 5:160 / 171 (91.2%), covers 98.1% of PF05974, 149.2 bits

XC_3752 hypothetical protein (NCBI) from Xanthomonas campestris pv. campestris str. 8004
Aligns to 5:160 / 171 (91.2%), covers 98.1% of PF05974, 149.0 bits

XOC_2462 ferritin-like domain-containing protein from Xanthomonas oryzae pv. oryzicola BLS256
Aligns to 1:150 / 161 (93.2%), covers 95.0% of PF05974, 140.9 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory