Family Search for PF06078 (DUF937)

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Running HMMer for PF06078

PF06078 hits 3 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

DR_0201 DUF937 domain-containing protein from Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539
DR0201 hypothetical protein from Deinococcus radiodurans R1
Aligns to 6:131 / 272 (46.3%), covers 93.3% of PF06078, 114.0 bits

• RNA-Seq-Based Comparative Transcriptome Analysis Highlights New Features of the Heat-Stress Response in the Extremophilic Bacterium Deinococcus radiodurans
  Xue, International journal of molecular sciences 2019
  • “...0.00011999 Hypothetical protein DR_A0364 4.3096 5.93 10 5 Oxidoreductase, short-chain dehydrogenase/reductase family [ 13 ] DR_0201 4.321 0.00785386 Hypothetical protein DR_0392 4.3342 0.00434331 Hypothetical protein [ 10 ] DR_0334 4.3572 0.01241591 Lipase, putative DR_B0038 4.3573 0.01463299 Hypothetical protein DR_A0352 4.3662 0.00155047 Methyl-accepting chemotaxis protein DR_2240 4.3942...”
• Characteristics of dr1790 disruptant and its functional analysis in Deinococcus radiodurans
  Cheng, Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] 2015
  • “...DR1306 Predicted secreted protein 2.03588 0.007 DRA0234 Hypothetical protein 2.04611 0.004 DR1114 HSP20 2.06477 0.005 DR0201 Hypothetical protein 2.08698 0.033 DRA0143 3-Hydroxyacyl-CoA dehydrogenase 2.08777 0.024 DR2385 Phenylacetic acid degradation protein PaaB 2.16397 0.008 DRA0290 Cell division protein FtsH (ftsH-3) 2.21667 0.007 DR0607 GroEL protein (groEL) 2.28587...”
• A novel OxyR sensor and regulator of hydrogen peroxide stress with one cysteine residue in Deinococcus radiodurans
  Chen, PloS one 2008
  • “...in MOxyR. Locus Annotation MOxyR H2O2 a Increase fold p value Increase fold p value DR0201 Predicted protein 2.92 0.00141 2.56 0.006516 DR0371 Predicted protein 2.57 0.007263 3.19 0.090488 DR0407 Membrane protein 2.65 0.030893 2.05 0.105049 DR0685 Uncharacterized secreted protein 2.15 0.000489 4.17 0.01594 DR0781 CHEY...”

NGR_c03840 hypothetical protein from Rhizobium sp. NGR234
Aligns to 6:137 / 272 (48.5%), covers 99.3% of PF06078, 96.7 bits

• Coordinated Regulation of the Size and Number of Polyhydroxybutyrate Granules by Core and Accessory Phasins in the Facultative Microsymbiont Sinorhizobium fredii NGR234
  Sun, Applied and environmental microbiology 2019 (secret)

MUL_3721 hypothetical protein from Mycobacterium ulcerans Agy99
Aligns to 8:138 / 201 (65.2%), covers 92.6% of PF06078, 77.5 bits

• Identification of the Mycobacterium ulcerans protein MUL_3720 as a promising target for the development of a diagnostic test for Buruli ulcer
  Dreyer, PLoS neglected tropical diseases 2015
  • “...arranged in an operon structure with two adjacent putative cell wall-associated protein coding genes ( MUL_3721 , MUL_3722 ). Immunofluorescence stainings of M. ulcerans bacilli confirmed the cell wall localization of MUL_3720. With its cell wall location, the two-domain structure including a mannose-binding N-terminal cytoplasmic component...”

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